Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 MNT-208ENST00000575394 606 ntTSL 4 BASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 AC011840.4-201ENST00000578471 627 ntBASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 AP005901.3-202ENST00000581653 237 ntBASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 PCDHB18P-201ENST00000524813 2368 ntBASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 AC022898.2-201ENST00000616822 1312 ntBASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 LETM1P2-201ENST00000597330 2178 ntBASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20■□□□□ 0.79
COL4A3BPQ9Y5P4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 AC246785.2-201ENST00000432512 513 ntBASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 AC091607.1-201ENST00000490318 1060 ntBASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 AL121894.2-201ENST00000602977 491 ntBASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
COL4A3BPQ9Y5P4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 IGHV3-47-201ENST00000425060 335 ntBASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 AL353801.3-201ENST00000609898 542 ntBASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
COL4A3BPQ9Y5P4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 FOSL1P1-201ENST00000511041 816 ntBASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 AC009154.2-201ENST00000621177 724 ntBASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 AL691432.3-201ENST00000621860 400 ntBASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
COL4A3BPQ9Y5P4 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms