Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.14■□□□□ 0.66
UBQLN1Q9UMX0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UBQLN1Q9UMX0 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
UBQLN1Q9UMX0 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.14■□□□□ 0.66
UBQLN1Q9UMX0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 DDX43P3-201ENST00000441064 443 ntBASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 IRF8-202ENST00000562492 946 ntTSL 3 BASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 AL355877.3-201ENST00000622820 899 ntBASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 KRT8P10-201ENST00000450021 1447 ntBASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
UBQLN1Q9UMX0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 AP002469.2-201ENST00000531724 424 ntBASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 AP005117.1-201ENST00000584346 1413 ntBASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
UBQLN1Q9UMX0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 AC103564.2-201ENST00000432853 1299 ntBASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 MTDHP3-201ENST00000594186 672 ntBASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
UBQLN1Q9UMX0 AC009949.1-201ENST00000623048 1830 ntBASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 FDX1P1-201ENST00000449115 551 ntBASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.11■□□□□ 0.65
UBQLN1Q9UMX0 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms