Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD1Q9UIS9 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD1Q9UIS9 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MBD1Q9UIS9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.97■□□□□ 0.47
MBD1Q9UIS9 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 MED15P5-201ENST00000423150 992 ntBASIC17.96■□□□□ 0.47
MBD1Q9UIS9 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 RNA5SP415-201ENST00000517246 115 ntBASIC17.96■□□□□ 0.47
MBD1Q9UIS9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 FAM197Y3-203ENST00000618346 717 ntBASIC17.96■□□□□ 0.47
MBD1Q9UIS9 AL691403.2-201ENST00000618460 490 ntBASIC17.96■□□□□ 0.47
MBD1Q9UIS9 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 AC132938.6-201ENST00000623828 1655 ntBASIC17.96■□□□□ 0.47
MBD1Q9UIS9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
MBD1Q9UIS9 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 AL096828.2-201ENST00000567259 1965 ntBASIC17.95■□□□□ 0.46
MBD1Q9UIS9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 KRT18P65-201ENST00000439811 1286 ntBASIC17.95■□□□□ 0.46
MBD1Q9UIS9 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD1Q9UIS9 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 NKAPP1-205ENST00000585790 367 ntBASIC17.94■□□□□ 0.46
MBD1Q9UIS9 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 Z83851.2-201ENST00000609564 659 ntBASIC17.94■□□□□ 0.46
MBD1Q9UIS9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.94■□□□□ 0.46
MBD1Q9UIS9 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD1Q9UIS9 REXO1L9P-201ENST00000604264 2108 ntBASIC17.93■□□□□ 0.46
MBD1Q9UIS9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.93■□□□□ 0.46
MBD1Q9UIS9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms