Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 PCED1CP-201ENST00000419887 785 ntBASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 KRT18P35-201ENST00000510488 1269 ntBASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.46■□□□□ 0.23
UBQLN4Q9NRR5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.46■□□□□ 0.22
UBQLN4Q9NRR5 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
UBQLN4Q9NRR5 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
UBQLN4Q9NRR5 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
UBQLN4Q9NRR5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 MIR1224-201ENST00000408193 85 ntBASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 BX276092.5-203ENST00000456199 560 ntBASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 AL121672.3-201ENST00000608644 468 ntBASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 AC010331.1-201ENST00000611423 582 ntBASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 AC116407.4-201ENST00000623319 1061 ntBASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 AC006116.8-202ENST00000587620 1550 ntBASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.45■□□□□ 0.22
UBQLN4Q9NRR5 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 AC012317.2-201ENST00000623305 2251 ntBASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 KRT8P47-201ENST00000604727 1398 ntBASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 IGHV3-41-201ENST00000613121 348 ntBASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
UBQLN4Q9NRR5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms