Protein–RNA interactions for Protein: Q9H094

NBPF3, Neuroblastoma breakpoint family member 3, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3Q9H094 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NBPF3Q9H094 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
NBPF3Q9H094 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NBPF3Q9H094 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NBPF3Q9H094 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NBPF3Q9H094 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NBPF3Q9H094 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
NBPF3Q9H094 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NBPF3Q9H094 PMS2P1-201ENST00000431037 1228 ntBASIC21.18■□□□□ 0.98
NBPF3Q9H094 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
NBPF3Q9H094 ABR-204ENST00000543210 1049 ntTSL 2 BASIC21.18■□□□□ 0.98
NBPF3Q9H094 AC074051.2-201ENST00000565115 352 ntBASIC21.18■□□□□ 0.98
NBPF3Q9H094 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.18■□□□□ 0.98
NBPF3Q9H094 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC21.18■□□□□ 0.98
NBPF3Q9H094 AC079416.2-201ENST00000625035 1193 ntBASIC21.18■□□□□ 0.98
NBPF3Q9H094 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC21.18■□□□□ 0.98
NBPF3Q9H094 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.18■□□□□ 0.98
NBPF3Q9H094 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NBPF3Q9H094 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NBPF3Q9H094 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.18■□□□□ 0.98
NBPF3Q9H094 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NBPF3Q9H094 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NBPF3Q9H094 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NBPF3Q9H094 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NBPF3Q9H094 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.17■□□□□ 0.98
NBPF3Q9H094 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NBPF3Q9H094 AL133373.2-201ENST00000623187 2828 ntBASIC21.17■□□□□ 0.98
NBPF3Q9H094 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NBPF3Q9H094 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NBPF3Q9H094 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NBPF3Q9H094 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NBPF3Q9H094 AL590627.1-203ENST00000421194 1026 ntBASIC21.17■□□□□ 0.98
NBPF3Q9H094 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.17■□□□□ 0.98
NBPF3Q9H094 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC21.17■□□□□ 0.98
NBPF3Q9H094 HLA-A-201ENST00000376802 1334 ntBASIC21.17■□□□□ 0.98
NBPF3Q9H094 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NBPF3Q9H094 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NBPF3Q9H094 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NBPF3Q9H094 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
NBPF3Q9H094 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NBPF3Q9H094 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.17■□□□□ 0.98
NBPF3Q9H094 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NBPF3Q9H094 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NBPF3Q9H094 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NBPF3Q9H094 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
NBPF3Q9H094 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NBPF3Q9H094 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NBPF3Q9H094 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NBPF3Q9H094 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NBPF3Q9H094 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NBPF3Q9H094 AC018470.1-201ENST00000624790 3129 ntBASIC21.16■□□□□ 0.98
NBPF3Q9H094 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NBPF3Q9H094 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NBPF3Q9H094 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NBPF3Q9H094 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NBPF3Q9H094 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
NBPF3Q9H094 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
NBPF3Q9H094 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NBPF3Q9H094 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NBPF3Q9H094 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.16■□□□□ 0.98
NBPF3Q9H094 AC006116.8-202ENST00000587620 1550 ntBASIC21.16■□□□□ 0.98
NBPF3Q9H094 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NBPF3Q9H094 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NBPF3Q9H094 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NBPF3Q9H094 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC21.16■□□□□ 0.98
NBPF3Q9H094 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NBPF3Q9H094 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.16■□□□□ 0.98
NBPF3Q9H094 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.16■□□□□ 0.98
NBPF3Q9H094 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
NBPF3Q9H094 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.16■□□□□ 0.98
NBPF3Q9H094 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NBPF3Q9H094 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF3Q9H094 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF3Q9H094 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF3Q9H094 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.15■□□□□ 0.98
NBPF3Q9H094 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF3Q9H094 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF3Q9H094 AC012317.2-201ENST00000623305 2251 ntBASIC21.15■□□□□ 0.98
NBPF3Q9H094 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF3Q9H094 AC022898.2-201ENST00000616822 1312 ntBASIC21.15■□□□□ 0.98
NBPF3Q9H094 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF3Q9H094 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF3Q9H094 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF3Q9H094 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.15■□□□□ 0.98
NBPF3Q9H094 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
NBPF3Q9H094 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF3Q9H094 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.15■□□□□ 0.98
NBPF3Q9H094 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.15■□□□□ 0.98
NBPF3Q9H094 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC21.15■□□□□ 0.98
NBPF3Q9H094 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF3Q9H094 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF3Q9H094 Z69720.1-201ENST00000601483 472 ntBASIC21.15■□□□□ 0.98
NBPF3Q9H094 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF3Q9H094 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC21.15■□□□□ 0.98
NBPF3Q9H094 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF3Q9H094 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NBPF3Q9H094 NOC2LP2-201ENST00000407594 1944 ntBASIC21.15■□□□□ 0.98
NBPF3Q9H094 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.15■□□□□ 0.98
NBPF3Q9H094 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NBPF3Q9H094 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms