Protein–RNA interactions for Protein: Q9BQ50

TREX2, Three prime repair exonuclease 2, humanhuman

Predicted RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX2Q9BQ50 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.83■□□□□ 0.28
TREX2Q9BQ50 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.83■□□□□ 0.28
TREX2Q9BQ50 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
TREX2Q9BQ50 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TREX2Q9BQ50 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TREX2Q9BQ50 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TREX2Q9BQ50 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
TREX2Q9BQ50 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TREX2Q9BQ50 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TREX2Q9BQ50 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 AC132938.6-201ENST00000623828 1655 ntBASIC16.82■□□□□ 0.28
TREX2Q9BQ50 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 AP000523.1-201ENST00000398242 1049 ntBASIC16.82■□□□□ 0.28
TREX2Q9BQ50 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 ATP5G2P1-201ENST00000433580 426 ntBASIC16.82■□□□□ 0.28
TREX2Q9BQ50 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 DUTP2-201ENST00000519164 463 ntBASIC16.82■□□□□ 0.28
TREX2Q9BQ50 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 HYMAI.1-201ENST00000620949 238 ntBASIC16.82■□□□□ 0.28
TREX2Q9BQ50 AL691432.3-201ENST00000621860 400 ntBASIC16.82■□□□□ 0.28
TREX2Q9BQ50 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TREX2Q9BQ50 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 MIR3917-201ENST00000580971 93 ntBASIC16.81■□□□□ 0.28
TREX2Q9BQ50 AC083849.1-201ENST00000615227 514 ntBASIC16.81■□□□□ 0.28
TREX2Q9BQ50 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.81■□□□□ 0.28
TREX2Q9BQ50 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX2Q9BQ50 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX2Q9BQ50 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.8■□□□□ 0.28
TREX2Q9BQ50 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX2Q9BQ50 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
TREX2Q9BQ50 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX2Q9BQ50 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.8■□□□□ 0.28
TREX2Q9BQ50 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX2Q9BQ50 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX2Q9BQ50 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TREX2Q9BQ50 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TREX2Q9BQ50 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TREX2Q9BQ50 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms