Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 IGLL3P-201ENST00000412472 434 ntBASIC18.99■□□□□ 0.63
RAD9AQ99638 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.99■□□□□ 0.63
RAD9AQ99638 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.99■□□□□ 0.63
RAD9AQ99638 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.99■□□□□ 0.63
RAD9AQ99638 SIGLEC30P-201ENST00000455569 941 ntBASIC18.99■□□□□ 0.63
RAD9AQ99638 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAD9AQ99638 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAD9AQ99638 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.99■□□□□ 0.63
RAD9AQ99638 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
RAD9AQ99638 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.99■□□□□ 0.63
RAD9AQ99638 AC027612.4-201ENST00000605371 583 ntBASIC18.99■□□□□ 0.63
RAD9AQ99638 AC004877.2-201ENST00000623941 599 ntBASIC18.99■□□□□ 0.63
RAD9AQ99638 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC18.99■□□□□ 0.63
RAD9AQ99638 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAD9AQ99638 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAD9AQ99638 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RAD9AQ99638 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RAD9AQ99638 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RAD9AQ99638 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.98■□□□□ 0.63
RAD9AQ99638 AL049757.1-201ENST00000616842 1596 ntBASIC18.98■□□□□ 0.63
RAD9AQ99638 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RAD9AQ99638 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.98■□□□□ 0.63
RAD9AQ99638 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAD9AQ99638 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.98■□□□□ 0.63
RAD9AQ99638 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAD9AQ99638 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAD9AQ99638 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAD9AQ99638 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
RAD9AQ99638 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RAD9AQ99638 ACTG1P14-201ENST00000446382 1122 ntBASIC18.98■□□□□ 0.63
RAD9AQ99638 AC096734.2-201ENST00000562054 433 ntBASIC18.98■□□□□ 0.63
RAD9AQ99638 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.98■□□□□ 0.63
RAD9AQ99638 AC148477.5-201ENST00000625164 1645 ntBASIC18.98■□□□□ 0.63
RAD9AQ99638 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAD9AQ99638 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAD9AQ99638 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
RAD9AQ99638 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
RAD9AQ99638 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.98■□□□□ 0.63
RAD9AQ99638 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.98■□□□□ 0.63
RAD9AQ99638 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
RAD9AQ99638 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAD9AQ99638 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.98■□□□□ 0.63
RAD9AQ99638 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.98■□□□□ 0.63
RAD9AQ99638 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RAD9AQ99638 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD9AQ99638 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD9AQ99638 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.97■□□□□ 0.63
RAD9AQ99638 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAD9AQ99638 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RAD9AQ99638 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD9AQ99638 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RAD9AQ99638 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC18.97■□□□□ 0.63
RAD9AQ99638 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD9AQ99638 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAD9AQ99638 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD9AQ99638 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.97■□□□□ 0.63
RAD9AQ99638 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAD9AQ99638 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
RAD9AQ99638 MRPL20P1-201ENST00000400819 433 ntBASIC18.97■□□□□ 0.63
RAD9AQ99638 AL035633.1-201ENST00000406139 838 ntBASIC18.97■□□□□ 0.63
RAD9AQ99638 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.97■□□□□ 0.63
RAD9AQ99638 TSEN15P1-201ENST00000423257 515 ntBASIC18.97■□□□□ 0.63
RAD9AQ99638 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.97■□□□□ 0.63
RAD9AQ99638 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.97■□□□□ 0.63
RAD9AQ99638 AP000344.2-201ENST00000512987 629 ntBASIC18.97■□□□□ 0.63
RAD9AQ99638 SPCS2P1-201ENST00000561636 679 ntBASIC18.97■□□□□ 0.63
RAD9AQ99638 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
RAD9AQ99638 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.97■□□□□ 0.63
RAD9AQ99638 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.97■□□□□ 0.63
RAD9AQ99638 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RAD9AQ99638 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD9AQ99638 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.97■□□□□ 0.63
RAD9AQ99638 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RAD9AQ99638 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.97■□□□□ 0.63
RAD9AQ99638 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RAD9AQ99638 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD9AQ99638 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.97■□□□□ 0.63
RAD9AQ99638 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAD9AQ99638 ESPNP-201ENST00000270691 2015 ntBASIC18.96■□□□□ 0.63
RAD9AQ99638 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAD9AQ99638 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RAD9AQ99638 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RAD9AQ99638 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAD9AQ99638 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAD9AQ99638 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAD9AQ99638 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAD9AQ99638 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAD9AQ99638 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.96■□□□□ 0.63
RAD9AQ99638 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAD9AQ99638 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.96■□□□□ 0.63
RAD9AQ99638 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.96■□□□□ 0.63
RAD9AQ99638 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.96■□□□□ 0.63
RAD9AQ99638 CIPC-205ENST00000555437 566 ntTSL 3 BASIC18.96■□□□□ 0.63
RAD9AQ99638 KRT19P2-202ENST00000557173 1012 ntBASIC18.96■□□□□ 0.63
RAD9AQ99638 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RAD9AQ99638 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.96■□□□□ 0.63
RAD9AQ99638 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.96■□□□□ 0.63
RAD9AQ99638 AC093028.1-201ENST00000622998 982 ntBASIC18.96■□□□□ 0.63
RAD9AQ99638 AL805961.1-202ENST00000641562 540 ntBASIC18.96■□□□□ 0.63
RAD9AQ99638 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms