Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.1■□□□□ 0.01
CLCC1Q96S66 AL645608.8-201ENST00000606034 2086 ntBASIC15.1■□□□□ 0.01
CLCC1Q96S66 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLCC1Q96S66 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLCC1Q96S66 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLCC1Q96S66 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLCC1Q96S66 MIR718-201ENST00000390190 70 ntBASIC15.1■□□□□ 0.01
CLCC1Q96S66 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.1■□□□□ 0.01
CLCC1Q96S66 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.1■□□□□ 0.01
CLCC1Q96S66 TSPY7P-201ENST00000431358 1114 ntBASIC15.1■□□□□ 0.01
CLCC1Q96S66 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC15.1■□□□□ 0.01
CLCC1Q96S66 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 NUDT16P1-203ENST00000513809 620 ntBASIC15.1■□□□□ 0.01
CLCC1Q96S66 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.1■□□□□ 0.01
CLCC1Q96S66 AC026471.5-201ENST00000615068 467 ntBASIC15.1■□□□□ 0.01
CLCC1Q96S66 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.1■□□□□ 0.01
CLCC1Q96S66 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CLCC1Q96S66 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.1■□□□□ 0.01
CLCC1Q96S66 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CLCC1Q96S66 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.1■□□□□ 0.01
CLCC1Q96S66 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
CLCC1Q96S66 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CLCC1Q96S66 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
CLCC1Q96S66 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCC1Q96S66 HEIH-201ENST00000623091 1652 ntBASIC15.09■□□□□ 0.01
CLCC1Q96S66 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCC1Q96S66 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCC1Q96S66 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCC1Q96S66 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCC1Q96S66 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCC1Q96S66 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLCC1Q96S66 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 MESTP1-201ENST00000404287 994 ntBASIC15.09■□□□□ 0.01
CLCC1Q96S66 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCC1Q96S66 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCC1Q96S66 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCC1Q96S66 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLCC1Q96S66 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CLCC1Q96S66 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCC1Q96S66 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CLCC1Q96S66 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.09■□□□□ 0.01
CLCC1Q96S66 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
CLCC1Q96S66 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
CLCC1Q96S66 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLCC1Q96S66 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLCC1Q96S66 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLCC1Q96S66 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.08■□□□□ 0.01
CLCC1Q96S66 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
CLCC1Q96S66 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
CLCC1Q96S66 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
CLCC1Q96S66 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.08■□□□□ 0.01
CLCC1Q96S66 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CLCC1Q96S66 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CLCC1Q96S66 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.08■□□□□ 0
CLCC1Q96S66 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.08■□□□□ 0
CLCC1Q96S66 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCC1Q96S66 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCC1Q96S66 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.08■□□□□ 0
CLCC1Q96S66 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CLCC1Q96S66 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CLCC1Q96S66 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms