Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
NEK1Q96PY6 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
NEK1Q96PY6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
NEK1Q96PY6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.16■□□□□ 0.98
NEK1Q96PY6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
NEK1Q96PY6 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC21.16■□□□□ 0.98
NEK1Q96PY6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
NEK1Q96PY6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC21.16■□□□□ 0.98
NEK1Q96PY6 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
NEK1Q96PY6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NEK1Q96PY6 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
NEK1Q96PY6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NEK1Q96PY6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
NEK1Q96PY6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NEK1Q96PY6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NEK1Q96PY6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC21.16■□□□□ 0.98
NEK1Q96PY6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC21.16■□□□□ 0.98
NEK1Q96PY6 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NEK1Q96PY6 FAM86EP-206ENST00000510506 987 ntBASIC21.16■□□□□ 0.98
NEK1Q96PY6 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.16■□□□□ 0.98
NEK1Q96PY6 HCG11-201ENST00000411553 5696 ntBASIC21.16■□□□□ 0.98
NEK1Q96PY6 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
NEK1Q96PY6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
NEK1Q96PY6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC21.16■□□□□ 0.98
NEK1Q96PY6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
NEK1Q96PY6 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NEK1Q96PY6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC21.16■□□□□ 0.98
NEK1Q96PY6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEK1Q96PY6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NEK1Q96PY6 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEK1Q96PY6 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
NEK1Q96PY6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.15■□□□□ 0.98
NEK1Q96PY6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NEK1Q96PY6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEK1Q96PY6 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEK1Q96PY6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NEK1Q96PY6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.15■□□□□ 0.98
NEK1Q96PY6 AC005332.1-201ENST00000577698 1310 ntBASIC21.15■□□□□ 0.98
NEK1Q96PY6 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEK1Q96PY6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NEK1Q96PY6 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEK1Q96PY6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEK1Q96PY6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.15■□□□□ 0.98
NEK1Q96PY6 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.15■□□□□ 0.98
NEK1Q96PY6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
NEK1Q96PY6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
NEK1Q96PY6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEK1Q96PY6 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEK1Q96PY6 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
NEK1Q96PY6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEK1Q96PY6 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEK1Q96PY6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
NEK1Q96PY6 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NEK1Q96PY6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEK1Q96PY6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEK1Q96PY6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NEK1Q96PY6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.14■□□□□ 0.98
NEK1Q96PY6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.14■□□□□ 0.98
NEK1Q96PY6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
NEK1Q96PY6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NEK1Q96PY6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.14■□□□□ 0.98
NEK1Q96PY6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NEK1Q96PY6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
NEK1Q96PY6 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NEK1Q96PY6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.14■□□□□ 0.97
NEK1Q96PY6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NEK1Q96PY6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC21.14■□□□□ 0.97
NEK1Q96PY6 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.14■□□□□ 0.97
NEK1Q96PY6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.14■□□□□ 0.97
NEK1Q96PY6 DDX43P3-201ENST00000441064 443 ntBASIC21.14■□□□□ 0.97
NEK1Q96PY6 CNP-204ENST00000472031 1019 ntTSL 2 BASIC21.14■□□□□ 0.97
NEK1Q96PY6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC21.14■□□□□ 0.97
NEK1Q96PY6 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.14■□□□□ 0.97
NEK1Q96PY6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.14■□□□□ 0.97
NEK1Q96PY6 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
NEK1Q96PY6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NEK1Q96PY6 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NEK1Q96PY6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
NEK1Q96PY6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC21.14■□□□□ 0.97
NEK1Q96PY6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
NEK1Q96PY6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NEK1Q96PY6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC21.14■□□□□ 0.97
NEK1Q96PY6 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NEK1Q96PY6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
NEK1Q96PY6 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NEK1Q96PY6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.13■□□□□ 0.97
NEK1Q96PY6 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.13■□□□□ 0.97
NEK1Q96PY6 RN7SL606P-201ENST00000472779 293 ntBASIC21.13■□□□□ 0.97
NEK1Q96PY6 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NEK1Q96PY6 GUSBP12-201ENST00000513727 720 ntBASIC21.13■□□□□ 0.97
NEK1Q96PY6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
NEK1Q96PY6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.13■□□□□ 0.97
NEK1Q96PY6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NEK1Q96PY6 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
NEK1Q96PY6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NEK1Q96PY6 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
NEK1Q96PY6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC21.13■□□□□ 0.97
NEK1Q96PY6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NEK1Q96PY6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NEK1Q96PY6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms