Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 KRT18P3-201ENST00000451602 1288 ntBASIC20.88■□□□□ 0.93
TRIM47Q96LD4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 MIR3687-2-201ENST00000577708 61 ntBASIC20.88■□□□□ 0.93
TRIM47Q96LD4 MIR3687-1-201ENST00000614492 61 ntBASIC20.88■□□□□ 0.93
TRIM47Q96LD4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 HLA-J-201ENST00000462773 1622 ntBASIC20.88■□□□□ 0.93
TRIM47Q96LD4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 INTS4P1-201ENST00000438455 1935 ntBASIC20.88■□□□□ 0.93
TRIM47Q96LD4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM47Q96LD4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 AC004967.1-201ENST00000453589 447 ntBASIC20.87■□□□□ 0.93
TRIM47Q96LD4 RNA5SP415-201ENST00000517246 115 ntBASIC20.87■□□□□ 0.93
TRIM47Q96LD4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 Z83851.2-201ENST00000609564 659 ntBASIC20.87■□□□□ 0.93
TRIM47Q96LD4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TRIM47Q96LD4 AP005117.1-201ENST00000584346 1413 ntBASIC20.87■□□□□ 0.93
TRIM47Q96LD4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM47Q96LD4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM47Q96LD4 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms