Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 KRT16P4-201ENST00000453883 522 ntBASIC16.14■□□□□ 0.17
LRRC46Q96FV0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 AL160237.2-201ENST00000556165 472 ntBASIC16.14■□□□□ 0.17
LRRC46Q96FV0 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 AL732292.2-201ENST00000609649 430 ntBASIC16.14■□□□□ 0.17
LRRC46Q96FV0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.14■□□□□ 0.17
LRRC46Q96FV0 AC068587.9-201ENST00000641814 219 ntBASIC16.14■□□□□ 0.17
LRRC46Q96FV0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 CROCCP1-201ENST00000426910 5675 ntBASIC16.14■□□□□ 0.17
LRRC46Q96FV0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LRRC46Q96FV0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 AL353692.3-201ENST00000407031 1396 ntBASIC16.13■□□□□ 0.17
LRRC46Q96FV0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 Z98044.1-201ENST00000632503 1764 ntBASIC16.13■□□□□ 0.17
LRRC46Q96FV0 LINC00167-201ENST00000530583 1419 ntBASIC16.13■□□□□ 0.17
LRRC46Q96FV0 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 EMBP1-201ENST00000458200 901 ntBASIC16.13■□□□□ 0.17
LRRC46Q96FV0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 UNC93B7-201ENST00000509439 705 ntBASIC16.13■□□□□ 0.17
LRRC46Q96FV0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LRRC46Q96FV0 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 AC009053.2-201ENST00000563701 2365 ntBASIC16.12■□□□□ 0.17
LRRC46Q96FV0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 POM121L3P-201ENST00000419331 1163 ntBASIC16.12■□□□□ 0.17
LRRC46Q96FV0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.12■□□□□ 0.17
LRRC46Q96FV0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LRRC46Q96FV0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms