Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 CR769767.2-201ENST00000622735 460 ntBASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RTN4IP1Q8WWV3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 AC087499.1-201ENST00000418141 1075 ntBASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 WWOX-216ENST00000569818 525 ntBASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 LINC01568-207ENST00000641790 1380 ntBASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.06■□□□□ 0
RTN4IP1Q8WWV3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RTN4IP1Q8WWV3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
RTN4IP1Q8WWV3 SDHAP2-201ENST00000455183 2001 ntBASIC15.05■□□□□ 0
RTN4IP1Q8WWV3 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
RTN4IP1Q8WWV3 AP001094.4-201ENST00000579008 2176 ntBASIC15.05■□□□□ 0
RTN4IP1Q8WWV3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.05■□□□□ 0
RTN4IP1Q8WWV3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
RTN4IP1Q8WWV3 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
RTN4IP1Q8WWV3 NF2-208ENST00000403435 2568 ntTSL 5 BASIC15.05■□□□□ 0
RTN4IP1Q8WWV3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
RTN4IP1Q8WWV3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ 0
RTN4IP1Q8WWV3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RTN4IP1Q8WWV3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.05■□□□□ 0
RTN4IP1Q8WWV3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
RTN4IP1Q8WWV3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.05■□□□□ 0
RTN4IP1Q8WWV3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 ECEL1P2-202ENST00000465689 757 ntBASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 KRT18P22-201ENST00000402024 1347 ntBASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
RTN4IP1Q8WWV3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms