Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 AC067750.1-201ENST00000608826 6545 ntBASIC11.13□□□□□ -0.63
SVIPQ8NHG7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 RASGRP4-207ENST00000587738 2293 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
SVIPQ8NHG7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 PCDHA14-201ENST00000506751 2298 ntBASIC11.12□□□□□ -0.63
SVIPQ8NHG7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 SERF1A-209ENST00000513436 1693 ntTSL 3 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 TCF4-232ENST00000566286 2119 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 AGMO-201ENST00000342526 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 M1AP-202ENST00000409585 2457 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 C1R-201ENST00000535233 2211 ntTSL 2 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 MAGEB16-202ENST00000399987 1736 ntAPPRIS P2 TSL 5 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.12□□□□□ -0.63
SVIPQ8NHG7 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 PDE9A-207ENST00000398224 1671 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 PDE9A-210ENST00000398229 1684 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 AL109659.2-201ENST00000606809 1674 ntBASIC11.11□□□□□ -0.63
SVIPQ8NHG7 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC11.11□□□□□ -0.63
SVIPQ8NHG7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms