Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 AC008764.6-201ENST00000595909 2069 ntBASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
SPTSSBQ8NFR3 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 KRT8P36-201ENST00000489121 1440 ntBASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 MTMR3-201ENST00000323630 5866 ntTSL 5 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 AL031598.1-201ENST00000561511 1773 ntBASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
SPTSSBQ8NFR3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 KRT125P-201ENST00000546827 989 ntBASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
SPTSSBQ8NFR3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms