Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 SDHAP2-201ENST00000455183 2001 ntBASIC20.24■□□□□ 0.83
RETREG2Q8NC44 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 PMS2P1-201ENST00000431037 1228 ntBASIC20.24■□□□□ 0.83
RETREG2Q8NC44 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 AC091607.1-201ENST00000490318 1060 ntBASIC20.24■□□□□ 0.83
RETREG2Q8NC44 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 AL773604.1-201ENST00000617417 272 ntBASIC20.24■□□□□ 0.83
RETREG2Q8NC44 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
RETREG2Q8NC44 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 AC113404.2-201ENST00000507884 177 ntBASIC20.23■□□□□ 0.83
RETREG2Q8NC44 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 IL9RP2-201ENST00000423948 1312 ntBASIC20.23■□□□□ 0.83
RETREG2Q8NC44 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.23■□□□□ 0.83
RETREG2Q8NC44 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.22■□□□□ 0.83
RETREG2Q8NC44 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 DDT-203ENST00000403754 569 ntTSL 3 BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 DDT-206ENST00000430101 573 ntTSL 2 BASIC20.21■□□□□ 0.83
RETREG2Q8NC44 AF186996.4-201ENST00000467186 377 ntBASIC20.21■□□□□ 0.83
RETREG2Q8NC44 AC093909.1-201ENST00000504731 1122 ntBASIC20.21■□□□□ 0.83
RETREG2Q8NC44 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms