Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAM1L1Q8N609 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAM1L1Q8N609 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAM1L1Q8N609 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAM1L1Q8N609 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAM1L1Q8N609 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.64■□□□□ 0.42
TRAM1L1Q8N609 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAM1L1Q8N609 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.64■□□□□ 0.42
TRAM1L1Q8N609 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 FAM220CP-201ENST00000395253 831 ntBASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 NUS1P2-201ENST00000417358 873 ntBASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 TSPY19P-201ENST00000418461 509 ntBASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 TSPY18P-201ENST00000441642 509 ntBASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TRAM1L1Q8N609 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 BX276092.7-203ENST00000637198 1536 ntBASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 COX5BP2-201ENST00000392354 334 ntBASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 RCN1P2-201ENST00000398357 915 ntBASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 DUSP5P1-201ENST00000441325 1139 ntBASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 KRT16P4-201ENST00000453883 522 ntBASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAM1L1Q8N609 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms