Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEFF1Q8IYR6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TMEFF1Q8IYR6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 AC211486.1-202ENST00000416371 468 ntBASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 KRT18P27-201ENST00000427733 1299 ntBASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 AC108751.1-201ENST00000490852 363 ntBASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 AC211476.1-201ENST00000503899 468 ntBASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 AC006557.2-201ENST00000592985 1240 ntBASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 AL596442.2-201ENST00000610240 980 ntBASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 AC132938.6-201ENST00000623828 1655 ntBASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 AC020763.4-201ENST00000623414 4170 ntBASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEFF1Q8IYR6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 KRT18P2-201ENST00000447938 1258 ntBASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 AC004408.2-201ENST00000623613 2777 ntBASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 GMCL1P1-201ENST00000463439 1581 ntBASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 AC010460.3-201ENST00000511359 1579 ntBASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEFF1Q8IYR6 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 AC073621.1-201ENST00000392730 636 ntBASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 PGM5P2-202ENST00000637225 1043 ntBASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEFF1Q8IYR6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms