Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC83Q8IWF9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
CCDC83Q8IWF9 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.95
CCDC83Q8IWF9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 KRT8P47-201ENST00000604727 1398 ntBASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 AC011558.1-201ENST00000623459 338 ntBASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 LINC00304-203ENST00000565008 1864 ntBASIC21.01■□□□□ 0.95
CCDC83Q8IWF9 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC83Q8IWF9 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC21■□□□□ 0.95
CCDC83Q8IWF9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC83Q8IWF9 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC83Q8IWF9 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC83Q8IWF9 BOC-212ENST00000485230 2173 ntTSL 2 BASIC21■□□□□ 0.95
CCDC83Q8IWF9 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21■□□□□ 0.95
CCDC83Q8IWF9 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCDC83Q8IWF9 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC83Q8IWF9 AC133963.1-201ENST00000504166 1679 ntBASIC21■□□□□ 0.95
CCDC83Q8IWF9 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC83Q8IWF9 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC83Q8IWF9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC21■□□□□ 0.95
CCDC83Q8IWF9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC21■□□□□ 0.95
CCDC83Q8IWF9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21■□□□□ 0.95
CCDC83Q8IWF9 AC139887.4-201ENST00000607877 719 ntBASIC21■□□□□ 0.95
CCDC83Q8IWF9 AC012306.2-201ENST00000609350 630 ntBASIC21■□□□□ 0.95
CCDC83Q8IWF9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21■□□□□ 0.95
CCDC83Q8IWF9 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC83Q8IWF9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
CCDC83Q8IWF9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC21■□□□□ 0.95
CCDC83Q8IWF9 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC21■□□□□ 0.95
CCDC83Q8IWF9 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
CCDC83Q8IWF9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21■□□□□ 0.95
CCDC83Q8IWF9 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21■□□□□ 0.95
CCDC83Q8IWF9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC83Q8IWF9 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCDC83Q8IWF9 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 TERF1P1-201ENST00000311003 1181 ntBASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 AC113347.1-201ENST00000413321 391 ntBASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 AC092597.1-201ENST00000487352 616 ntBASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 AC004263.2-201ENST00000617183 678 ntBASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 SIRPAP1-201ENST00000448467 1770 ntBASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCDC83Q8IWF9 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.98■□□□□ 0.95
CCDC83Q8IWF9 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms