Protein–RNA interactions for Protein: Q8IUZ0

LRRC49, Leucine-rich repeat-containing protein 49, humanhuman

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49Q8IUZ0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 VENTXP7-201ENST00000475503 772 ntBASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 AL358472.4-201ENST00000633140 710 ntBASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.24■□□□□ 0.51
LRRC49Q8IUZ0 BX276092.7-203ENST00000637198 1536 ntBASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 AC134043.2-201ENST00000624206 2238 ntBASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRC49Q8IUZ0 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 AC009949.1-201ENST00000623048 1830 ntBASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 DRAXINP1-201ENST00000437611 948 ntBASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 LINC01451-201ENST00000623792 534 ntBASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC49Q8IUZ0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC49Q8IUZ0 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC49Q8IUZ0 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC49Q8IUZ0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC49Q8IUZ0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC49Q8IUZ0 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC49Q8IUZ0 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms