Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.54■□□□□ 0.4
LRRTM4Q86VH4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 AC096633.1-201ENST00000422446 749 ntBASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 AC011467.2-201ENST00000598425 242 ntBASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 IFNL4P1-201ENST00000607083 540 ntBASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 AC100803.2-201ENST00000562459 1963 ntBASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRRTM4Q86VH4 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 RCN1P2-201ENST00000398357 915 ntBASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 MIR5100-201ENST00000579544 119 ntBASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 AL591684.3-201ENST00000605187 298 ntBASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRRTM4Q86VH4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRTM4Q86VH4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRTM4Q86VH4 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRTM4Q86VH4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRTM4Q86VH4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LRRTM4Q86VH4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRTM4Q86VH4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRTM4Q86VH4 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRTM4Q86VH4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRTM4Q86VH4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRTM4Q86VH4 KRT18P55-202ENST00000578578 1546 ntBASIC17.52■□□□□ 0.39
LRRTM4Q86VH4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.52■□□□□ 0.39
LRRTM4Q86VH4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.52■□□□□ 0.39
LRRTM4Q86VH4 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRTM4Q86VH4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRTM4Q86VH4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRTM4Q86VH4 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRRTM4Q86VH4 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.51■□□□□ 0.39
LRRTM4Q86VH4 AC007967.3-201ENST00000434308 558 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms