Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.76■□□□□ 0.59
RNF43Q68DV7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.76■□□□□ 0.59
RNF43Q68DV7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC18.76■□□□□ 0.59
RNF43Q68DV7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.76■□□□□ 0.59
RNF43Q68DV7 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.76■□□□□ 0.59
RNF43Q68DV7 TPSP2-201ENST00000561760 610 ntBASIC18.76■□□□□ 0.59
RNF43Q68DV7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF43Q68DV7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.76■□□□□ 0.59
RNF43Q68DV7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.76■□□□□ 0.59
RNF43Q68DV7 AL031008.1-201ENST00000619963 541 ntBASIC18.76■□□□□ 0.59
RNF43Q68DV7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RNF43Q68DV7 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF43Q68DV7 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.76■□□□□ 0.59
RNF43Q68DV7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF43Q68DV7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.76■□□□□ 0.59
RNF43Q68DV7 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RNF43Q68DV7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF43Q68DV7 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF43Q68DV7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RNF43Q68DV7 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF43Q68DV7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNF43Q68DV7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF43Q68DV7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
RNF43Q68DV7 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF43Q68DV7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RNF43Q68DV7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF43Q68DV7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF43Q68DV7 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
RNF43Q68DV7 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF43Q68DV7 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF43Q68DV7 AP002414.4-201ENST00000589764 1148 ntBASIC18.75■□□□□ 0.59
RNF43Q68DV7 AL353801.3-201ENST00000609898 542 ntBASIC18.75■□□□□ 0.59
RNF43Q68DV7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.75■□□□□ 0.59
RNF43Q68DV7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
RNF43Q68DV7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNF43Q68DV7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.75■□□□□ 0.59
RNF43Q68DV7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
RNF43Q68DV7 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF43Q68DV7 AC134043.2-201ENST00000624206 2238 ntBASIC18.74■□□□□ 0.59
RNF43Q68DV7 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF43Q68DV7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RNF43Q68DV7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF43Q68DV7 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF43Q68DV7 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF43Q68DV7 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.74■□□□□ 0.59
RNF43Q68DV7 AC090616.6-201ENST00000582640 721 ntBASIC18.74■□□□□ 0.59
RNF43Q68DV7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF43Q68DV7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RNF43Q68DV7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF43Q68DV7 AC008687.5-201ENST00000593746 558 ntBASIC18.74■□□□□ 0.59
RNF43Q68DV7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF43Q68DV7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.74■□□□□ 0.59
RNF43Q68DV7 LINC01711-201ENST00000598340 967 ntBASIC18.74■□□□□ 0.59
RNF43Q68DV7 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF43Q68DV7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
RNF43Q68DV7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF43Q68DV7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNF43Q68DV7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF43Q68DV7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
RNF43Q68DV7 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF43Q68DV7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.74■□□□□ 0.59
RNF43Q68DV7 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNF43Q68DV7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.74■□□□□ 0.59
RNF43Q68DV7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
RNF43Q68DV7 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF43Q68DV7 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF43Q68DV7 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
RNF43Q68DV7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RNF43Q68DV7 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
RNF43Q68DV7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF43Q68DV7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF43Q68DV7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF43Q68DV7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RNF43Q68DV7 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RNF43Q68DV7 AL353692.3-201ENST00000407031 1396 ntBASIC18.73■□□□□ 0.59
RNF43Q68DV7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.73■□□□□ 0.59
RNF43Q68DV7 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.73■□□□□ 0.59
RNF43Q68DV7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms