Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
LRRC38Q5VT99 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC38Q5VT99 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.56■□□□□ 0.56
LRRC38Q5VT99 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LRRC38Q5VT99 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.56■□□□□ 0.56
LRRC38Q5VT99 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC38Q5VT99 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC38Q5VT99 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.56■□□□□ 0.56
LRRC38Q5VT99 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC38Q5VT99 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC38Q5VT99 AC006011.2-201ENST00000621313 1158 ntBASIC18.56■□□□□ 0.56
LRRC38Q5VT99 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC38Q5VT99 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRRC38Q5VT99 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
LRRC38Q5VT99 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
LRRC38Q5VT99 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.56■□□□□ 0.56
LRRC38Q5VT99 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.56■□□□□ 0.56
LRRC38Q5VT99 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 BX276092.7-203ENST00000637198 1536 ntBASIC18.55■□□□□ 0.56
LRRC38Q5VT99 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 AC211429.1-201ENST00000415277 523 ntBASIC18.55■□□□□ 0.56
LRRC38Q5VT99 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 AC005104.2-201ENST00000427818 678 ntBASIC18.55■□□□□ 0.56
LRRC38Q5VT99 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 AC068472.1-201ENST00000474589 881 ntBASIC18.55■□□□□ 0.56
LRRC38Q5VT99 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRRC38Q5VT99 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 HCG11-201ENST00000411553 5696 ntBASIC18.54■□□□□ 0.56
LRRC38Q5VT99 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 AK4P3-201ENST00000418260 669 ntBASIC18.54■□□□□ 0.56
LRRC38Q5VT99 MTCL1P1-201ENST00000446207 792 ntBASIC18.54■□□□□ 0.56
LRRC38Q5VT99 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRRC38Q5VT99 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRRC38Q5VT99 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms