Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
IRX4P78413 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX4P78413 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX4P78413 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
IRX4P78413 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX4P78413 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.62■□□□□ 0.57
IRX4P78413 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.62■□□□□ 0.57
IRX4P78413 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.62■□□□□ 0.57
IRX4P78413 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.62■□□□□ 0.57
IRX4P78413 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.62■□□□□ 0.57
IRX4P78413 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.62■□□□□ 0.57
IRX4P78413 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX4P78413 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX4P78413 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX4P78413 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX4P78413 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IRX4P78413 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.62■□□□□ 0.57
IRX4P78413 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.62■□□□□ 0.57
IRX4P78413 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX4P78413 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IRX4P78413 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
IRX4P78413 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX4P78413 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
IRX4P78413 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.62■□□□□ 0.57
IRX4P78413 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX4P78413 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX4P78413 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX4P78413 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
IRX4P78413 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
IRX4P78413 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
IRX4P78413 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.62■□□□□ 0.57
IRX4P78413 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX4P78413 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IRX4P78413 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
IRX4P78413 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX4P78413 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.61■□□□□ 0.57
IRX4P78413 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
IRX4P78413 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX4P78413 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX4P78413 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.61■□□□□ 0.57
IRX4P78413 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX4P78413 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX4P78413 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.61■□□□□ 0.57
IRX4P78413 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.61■□□□□ 0.57
IRX4P78413 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX4P78413 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX4P78413 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.61■□□□□ 0.57
IRX4P78413 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.61■□□□□ 0.57
IRX4P78413 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.61■□□□□ 0.57
IRX4P78413 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.61■□□□□ 0.57
IRX4P78413 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
IRX4P78413 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.61■□□□□ 0.57
IRX4P78413 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.61■□□□□ 0.57
IRX4P78413 TSPY22P-201ENST00000427496 604 ntBASIC18.61■□□□□ 0.57
IRX4P78413 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX4P78413 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IRX4P78413 AP000867.3-201ENST00000524675 377 ntBASIC18.61■□□□□ 0.57
IRX4P78413 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IRX4P78413 AL121772.3-201ENST00000610840 674 ntBASIC18.61■□□□□ 0.57
IRX4P78413 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.61■□□□□ 0.57
IRX4P78413 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.61■□□□□ 0.57
IRX4P78413 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IRX4P78413 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IRX4P78413 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IRX4P78413 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IRX4P78413 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX4P78413 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX4P78413 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
IRX4P78413 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
IRX4P78413 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX4P78413 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
IRX4P78413 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IRX4P78413 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX4P78413 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX4P78413 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX4P78413 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
IRX4P78413 AC036111.1-201ENST00000533973 1582 ntBASIC18.6■□□□□ 0.57
IRX4P78413 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
IRX4P78413 MTMR9LP-203ENST00000426597 1545 ntBASIC18.6■□□□□ 0.57
IRX4P78413 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
IRX4P78413 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX4P78413 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.6■□□□□ 0.57
IRX4P78413 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.6■□□□□ 0.57
IRX4P78413 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IRX4P78413 TPSP2-201ENST00000561760 610 ntBASIC18.6■□□□□ 0.57
IRX4P78413 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
IRX4P78413 LINC01711-201ENST00000598340 967 ntBASIC18.6■□□□□ 0.57
IRX4P78413 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IRX4P78413 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.6■□□□□ 0.57
IRX4P78413 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX4P78413 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
IRX4P78413 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX4P78413 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.6■□□□□ 0.57
IRX4P78413 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX4P78413 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX4P78413 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
IRX4P78413 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
IRX4P78413 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
IRX4P78413 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
IRX4P78413 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms