Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SNRPFP62306 HLA-J-201ENST00000462773 1622 ntBASIC19.41■□□□□ 0.7
SNRPFP62306 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRPFP62306 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRPFP62306 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SNRPFP62306 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRPFP62306 AC007967.3-201ENST00000434308 558 ntBASIC19.41■□□□□ 0.7
SNRPFP62306 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.41■□□□□ 0.7
SNRPFP62306 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.41■□□□□ 0.7
SNRPFP62306 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.41■□□□□ 0.7
SNRPFP62306 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.41■□□□□ 0.7
SNRPFP62306 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
SNRPFP62306 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.41■□□□□ 0.7
SNRPFP62306 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.41■□□□□ 0.7
SNRPFP62306 LINC00304-203ENST00000565008 1864 ntBASIC19.41■□□□□ 0.7
SNRPFP62306 AL133373.2-201ENST00000623187 2828 ntBASIC19.41■□□□□ 0.7
SNRPFP62306 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRPFP62306 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SNRPFP62306 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
SNRPFP62306 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.41■□□□□ 0.7
SNRPFP62306 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SNRPFP62306 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.4■□□□□ 0.7
SNRPFP62306 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SNRPFP62306 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRPFP62306 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.4■□□□□ 0.7
SNRPFP62306 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRPFP62306 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRPFP62306 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRPFP62306 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.4■□□□□ 0.7
SNRPFP62306 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SNRPFP62306 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.4■□□□□ 0.7
SNRPFP62306 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.4■□□□□ 0.7
SNRPFP62306 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.4■□□□□ 0.7
SNRPFP62306 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SNRPFP62306 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.4■□□□□ 0.7
SNRPFP62306 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SNRPFP62306 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRPFP62306 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.4■□□□□ 0.7
SNRPFP62306 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNRPFP62306 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC19.4■□□□□ 0.7
SNRPFP62306 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRPFP62306 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SNRPFP62306 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRPFP62306 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SNRPFP62306 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.4■□□□□ 0.7
SNRPFP62306 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRPFP62306 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.4■□□□□ 0.7
SNRPFP62306 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.4■□□□□ 0.7
SNRPFP62306 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRPFP62306 AC018470.1-201ENST00000624790 3129 ntBASIC19.4■□□□□ 0.7
SNRPFP62306 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRPFP62306 AC010460.3-201ENST00000511359 1579 ntBASIC19.4■□□□□ 0.7
SNRPFP62306 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.4■□□□□ 0.7
SNRPFP62306 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
SNRPFP62306 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
SNRPFP62306 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.4■□□□□ 0.7
SNRPFP62306 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SNRPFP62306 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SNRPFP62306 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNRPFP62306 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
SNRPFP62306 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SNRPFP62306 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SNRPFP62306 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRPFP62306 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRPFP62306 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.39■□□□□ 0.69
SNRPFP62306 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRPFP62306 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRPFP62306 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRPFP62306 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.39■□□□□ 0.69
SNRPFP62306 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNRPFP62306 KRT17P6-201ENST00000453795 1220 ntBASIC19.39■□□□□ 0.69
SNRPFP62306 TOB2P1-201ENST00000469761 992 ntBASIC19.39■□□□□ 0.69
SNRPFP62306 AC002558.1-201ENST00000488906 803 ntBASIC19.39■□□□□ 0.69
SNRPFP62306 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.39■□□□□ 0.69
SNRPFP62306 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNRPFP62306 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC19.39■□□□□ 0.69
SNRPFP62306 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.39■□□□□ 0.69
SNRPFP62306 AP005901.3-202ENST00000581653 237 ntBASIC19.39■□□□□ 0.69
SNRPFP62306 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.39■□□□□ 0.69
SNRPFP62306 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.39■□□□□ 0.69
SNRPFP62306 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
SNRPFP62306 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
SNRPFP62306 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.39■□□□□ 0.69
SNRPFP62306 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRPFP62306 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNRPFP62306 REXO1L11P-201ENST00000620964 1927 ntBASIC19.39■□□□□ 0.69
SNRPFP62306 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.39■□□□□ 0.69
SNRPFP62306 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SNRPFP62306 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRPFP62306 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.39■□□□□ 0.69
SNRPFP62306 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SNRPFP62306 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRPFP62306 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRPFP62306 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SNRPFP62306 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.38■□□□□ 0.69
SNRPFP62306 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRPFP62306 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRPFP62306 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.38■□□□□ 0.69
SNRPFP62306 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SNRPFP62306 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms