Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5BP61020 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB5BP61020 AL031963.3-201ENST00000606441 850 ntBASIC14.02□□□□□ -0.17
RAB5BP61020 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.02□□□□□ -0.17
RAB5BP61020 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB5BP61020 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5BP61020 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5BP61020 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
RAB5BP61020 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5BP61020 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.02□□□□□ -0.17
RAB5BP61020 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5BP61020 SDHAP1-207ENST00000440850 2000 ntBASIC14.02□□□□□ -0.17
RAB5BP61020 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5BP61020 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5BP61020 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RAB5BP61020 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RAB5BP61020 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
RAB5BP61020 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RAB5BP61020 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5BP61020 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RAB5BP61020 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5BP61020 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5BP61020 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RAB5BP61020 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5BP61020 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RAB5BP61020 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RAB5BP61020 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB5BP61020 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC14.01□□□□□ -0.17
RAB5BP61020 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB5BP61020 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RAB5BP61020 AC007322.3-201ENST00000426526 701 ntBASIC14.01□□□□□ -0.17
RAB5BP61020 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5BP61020 DUX4L19-201ENST00000557448 1267 ntBASIC14.01□□□□□ -0.17
RAB5BP61020 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB5BP61020 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB5BP61020 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5BP61020 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5BP61020 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
RAB5BP61020 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.01□□□□□ -0.17
RAB5BP61020 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5BP61020 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5BP61020 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5BP61020 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5BP61020 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5BP61020 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5BP61020 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB5BP61020 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
RAB5BP61020 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB5BP61020 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5BP61020 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5BP61020 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RAB5BP61020 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5BP61020 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5BP61020 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RAB5BP61020 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB5BP61020 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.01□□□□□ -0.17
RAB5BP61020 PTBP1P-201ENST00000554374 1601 ntBASIC14.01□□□□□ -0.17
RAB5BP61020 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC14.01□□□□□ -0.17
RAB5BP61020 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RAB5BP61020 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14□□□□□ -0.17
RAB5BP61020 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
RAB5BP61020 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14□□□□□ -0.17
RAB5BP61020 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
RAB5BP61020 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
RAB5BP61020 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14□□□□□ -0.17
RAB5BP61020 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 CICP4-201ENST00000447359 2812 ntBASIC14□□□□□ -0.17
RAB5BP61020 SLC9A7P1-201ENST00000554295 3311 ntBASIC14□□□□□ -0.17
RAB5BP61020 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14□□□□□ -0.17
RAB5BP61020 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14□□□□□ -0.17
RAB5BP61020 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14□□□□□ -0.17
RAB5BP61020 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RAB5BP61020 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
RAB5BP61020 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5BP61020 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC13.99□□□□□ -0.17
RAB5BP61020 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5BP61020 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5BP61020 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RAB5BP61020 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.99□□□□□ -0.17
RAB5BP61020 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms