Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AL121912.1-201ENST00000603683 238 ntBASIC13.1□□□□□ -0.31
APOC4P55056 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.1□□□□□ -0.31
APOC4P55056 REXO1L6P-202ENST00000619970 1078 ntBASIC13.1□□□□□ -0.31
APOC4P55056 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC4P55056 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC4P55056 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.1□□□□□ -0.31
APOC4P55056 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.1□□□□□ -0.31
APOC4P55056 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
APOC4P55056 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOC4P55056 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC4P55056 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC4P55056 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
APOC4P55056 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
APOC4P55056 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC4P55056 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.09□□□□□ -0.31
APOC4P55056 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.09□□□□□ -0.31
APOC4P55056 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC4P55056 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOC4P55056 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
APOC4P55056 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOC4P55056 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.09□□□□□ -0.31
APOC4P55056 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC4P55056 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC4P55056 CD9-202ENST00000382515 1229 ntTSL 5 BASIC13.09□□□□□ -0.31
APOC4P55056 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
APOC4P55056 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.09□□□□□ -0.31
APOC4P55056 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC4P55056 TNXA-203ENST00000507684 2038 ntBASIC13.09□□□□□ -0.31
APOC4P55056 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
APOC4P55056 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.09□□□□□ -0.31
APOC4P55056 AL662844.1-201ENST00000546340 181 ntBASIC13.09□□□□□ -0.31
APOC4P55056 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
APOC4P55056 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.09□□□□□ -0.31
APOC4P55056 AC011467.2-201ENST00000598425 242 ntBASIC13.09□□□□□ -0.31
APOC4P55056 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.09□□□□□ -0.31
APOC4P55056 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC4P55056 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC4P55056 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC4P55056 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
APOC4P55056 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC4P55056 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC4P55056 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.09□□□□□ -0.31
APOC4P55056 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.09□□□□□ -0.31
APOC4P55056 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
APOC4P55056 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
APOC4P55056 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC4P55056 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
APOC4P55056 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
APOC4P55056 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
APOC4P55056 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
APOC4P55056 AC132938.6-201ENST00000623828 1655 ntBASIC13.08□□□□□ -0.31
APOC4P55056 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
APOC4P55056 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
APOC4P55056 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
APOC4P55056 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
APOC4P55056 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
APOC4P55056 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC4P55056 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC4P55056 KRT8P10-201ENST00000450021 1447 ntBASIC13.08□□□□□ -0.32
APOC4P55056 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC4P55056 RCN1P2-201ENST00000398357 915 ntBASIC13.08□□□□□ -0.32
APOC4P55056 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC4P55056 LSM5-204ENST00000409909 740 ntTSL 2 BASIC13.08□□□□□ -0.32
APOC4P55056 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC4P55056 RBM17P3-201ENST00000417687 1192 ntBASIC13.08□□□□□ -0.32
APOC4P55056 SRP19-202ENST00000445150 833 ntTSL 2 BASIC13.08□□□□□ -0.32
APOC4P55056 SCARNA2-201ENST00000458748 420 ntBASIC13.08□□□□□ -0.32
APOC4P55056 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC13.08□□□□□ -0.32
APOC4P55056 AL160237.2-201ENST00000556165 472 ntBASIC13.08□□□□□ -0.32
APOC4P55056 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.08□□□□□ -0.32
APOC4P55056 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.08□□□□□ -0.32
APOC4P55056 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.08□□□□□ -0.32
APOC4P55056 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.08□□□□□ -0.32
APOC4P55056 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC4P55056 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC4P55056 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
APOC4P55056 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC4P55056 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.08□□□□□ -0.32
APOC4P55056 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC4P55056 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC4P55056 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC4P55056 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
APOC4P55056 AC097374.2-201ENST00000618617 1306 ntBASIC13.08□□□□□ -0.32
APOC4P55056 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.08□□□□□ -0.32
APOC4P55056 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC4P55056 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
APOC4P55056 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.08□□□□□ -0.32
APOC4P55056 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
APOC4P55056 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms