Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
NKX2-1P43699 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NKX2-1P43699 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 KRASP1-201ENST00000407852 552 ntBASIC14.66□□□□□ -0.06
NKX2-1P43699 AC239809.2-201ENST00000415381 517 ntBASIC14.66□□□□□ -0.06
NKX2-1P43699 KRT17P3-201ENST00000420566 1262 ntBASIC14.66□□□□□ -0.06
NKX2-1P43699 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX2-1P43699 FAM207BP-201ENST00000447172 505 ntBASIC14.66□□□□□ -0.06
NKX2-1P43699 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 UNC93B5-201ENST00000530315 699 ntBASIC14.66□□□□□ -0.06
NKX2-1P43699 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NKX2-1P43699 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.66□□□□□ -0.06
NKX2-1P43699 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.66□□□□□ -0.06
NKX2-1P43699 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.66□□□□□ -0.06
NKX2-1P43699 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
NKX2-1P43699 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NKX2-1P43699 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX2-1P43699 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NKX2-1P43699 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.66□□□□□ -0.06
NKX2-1P43699 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.66□□□□□ -0.06
NKX2-1P43699 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NKX2-1P43699 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.65□□□□□ -0.06
NKX2-1P43699 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NKX2-1P43699 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
NKX2-1P43699 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC14.65□□□□□ -0.06
NKX2-1P43699 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
NKX2-1P43699 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
NKX2-1P43699 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
NKX2-1P43699 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC14.65□□□□□ -0.06
NKX2-1P43699 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
NKX2-1P43699 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC14.65□□□□□ -0.06
NKX2-1P43699 AP002982.1-201ENST00000492365 877 ntBASIC14.65□□□□□ -0.06
NKX2-1P43699 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.65□□□□□ -0.06
NKX2-1P43699 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NKX2-1P43699 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.65□□□□□ -0.06
NKX2-1P43699 AC069544.1-201ENST00000609399 999 ntBASIC14.65□□□□□ -0.06
NKX2-1P43699 AL023875.1-201ENST00000640777 796 ntBASIC14.65□□□□□ -0.06
NKX2-1P43699 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
NKX2-1P43699 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
NKX2-1P43699 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.65□□□□□ -0.06
NKX2-1P43699 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.65□□□□□ -0.06
NKX2-1P43699 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NKX2-1P43699 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NKX2-1P43699 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC14.65□□□□□ -0.06
NKX2-1P43699 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.65□□□□□ -0.06
NKX2-1P43699 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NKX2-1P43699 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.65□□□□□ -0.06
NKX2-1P43699 GPAT2P1-201ENST00000444924 1672 ntBASIC14.65□□□□□ -0.06
NKX2-1P43699 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.65□□□□□ -0.06
NKX2-1P43699 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NKX2-1P43699 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
NKX2-1P43699 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NKX2-1P43699 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
NKX2-1P43699 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.64□□□□□ -0.07
NKX2-1P43699 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NKX2-1P43699 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
NKX2-1P43699 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.64□□□□□ -0.07
NKX2-1P43699 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.64□□□□□ -0.07
NKX2-1P43699 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX2-1P43699 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX2-1P43699 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NKX2-1P43699 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NKX2-1P43699 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
NKX2-1P43699 KSR1P1-201ENST00000446298 240 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms