Protein–RNA interactions for Protein: P43234

CTSO, Cathepsin O, humanhuman

Predicted RBP Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSOP43234 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.1■□□□□ 0.49
CTSOP43234 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTSOP43234 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTSOP43234 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.1■□□□□ 0.49
CTSOP43234 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.1■□□□□ 0.49
CTSOP43234 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTSOP43234 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTSOP43234 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CTSOP43234 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTSOP43234 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTSOP43234 FAM220CP-201ENST00000395253 831 ntBASIC18.1■□□□□ 0.49
CTSOP43234 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.1■□□□□ 0.49
CTSOP43234 ABCD1P5-201ENST00000445663 754 ntBASIC18.1■□□□□ 0.49
CTSOP43234 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.1■□□□□ 0.49
CTSOP43234 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CTSOP43234 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTSOP43234 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTSOP43234 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
CTSOP43234 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTSOP43234 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTSOP43234 AC020763.4-201ENST00000623414 4170 ntBASIC18.1■□□□□ 0.49
CTSOP43234 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
CTSOP43234 HCG11-201ENST00000411553 5696 ntBASIC18.1■□□□□ 0.49
CTSOP43234 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTSOP43234 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTSOP43234 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSOP43234 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CTSOP43234 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.09■□□□□ 0.49
CTSOP43234 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CTSOP43234 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTSOP43234 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
CTSOP43234 AP005117.1-201ENST00000584346 1413 ntBASIC18.09■□□□□ 0.49
CTSOP43234 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSOP43234 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CTSOP43234 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSOP43234 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSOP43234 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSOP43234 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.09■□□□□ 0.49
CTSOP43234 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSOP43234 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
CTSOP43234 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.09■□□□□ 0.49
CTSOP43234 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CTSOP43234 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.09■□□□□ 0.49
CTSOP43234 AC079776.4-201ENST00000511039 504 ntBASIC18.09■□□□□ 0.49
CTSOP43234 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSOP43234 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTSOP43234 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSOP43234 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSOP43234 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSOP43234 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
CTSOP43234 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.09■□□□□ 0.49
CTSOP43234 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSOP43234 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTSOP43234 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.09■□□□□ 0.49
CTSOP43234 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTSOP43234 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CTSOP43234 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.09■□□□□ 0.49
CTSOP43234 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CTSOP43234 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.09■□□□□ 0.49
CTSOP43234 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTSOP43234 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTSOP43234 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CTSOP43234 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CTSOP43234 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.08■□□□□ 0.49
CTSOP43234 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTSOP43234 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.08■□□□□ 0.49
CTSOP43234 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTSOP43234 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.08■□□□□ 0.49
CTSOP43234 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSOP43234 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSOP43234 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSOP43234 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSOP43234 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.08■□□□□ 0.48
CTSOP43234 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.08■□□□□ 0.48
CTSOP43234 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTSOP43234 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.08■□□□□ 0.48
CTSOP43234 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSOP43234 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.08■□□□□ 0.48
CTSOP43234 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.08■□□□□ 0.48
CTSOP43234 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSOP43234 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.08■□□□□ 0.48
CTSOP43234 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.08■□□□□ 0.48
CTSOP43234 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.08■□□□□ 0.48
CTSOP43234 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.08■□□□□ 0.48
CTSOP43234 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
CTSOP43234 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.08■□□□□ 0.48
CTSOP43234 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CTSOP43234 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CTSOP43234 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSOP43234 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.08■□□□□ 0.48
CTSOP43234 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSOP43234 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.08■□□□□ 0.48
CTSOP43234 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.08■□□□□ 0.48
CTSOP43234 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CTSOP43234 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.48
CTSOP43234 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTSOP43234 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTSOP43234 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTSOP43234 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.07■□□□□ 0.48
CTSOP43234 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms