Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.83■□□□□ 0.6
GRIK1P39086 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.83■□□□□ 0.6
GRIK1P39086 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
GRIK1P39086 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.83■□□□□ 0.6
GRIK1P39086 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GRIK1P39086 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
GRIK1P39086 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.83■□□□□ 0.6
GRIK1P39086 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.83■□□□□ 0.6
GRIK1P39086 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
GRIK1P39086 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.83■□□□□ 0.6
GRIK1P39086 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.83■□□□□ 0.6
GRIK1P39086 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.83■□□□□ 0.6
GRIK1P39086 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.83■□□□□ 0.6
GRIK1P39086 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GRIK1P39086 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.83■□□□□ 0.6
GRIK1P39086 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
GRIK1P39086 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.82■□□□□ 0.6
GRIK1P39086 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
GRIK1P39086 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
GRIK1P39086 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 AC097374.2-201ENST00000618617 1306 ntBASIC18.82■□□□□ 0.6
GRIK1P39086 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.82■□□□□ 0.6
GRIK1P39086 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.82■□□□□ 0.6
GRIK1P39086 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.82■□□□□ 0.6
GRIK1P39086 AF238378.1-201ENST00000526806 358 ntBASIC18.82■□□□□ 0.6
GRIK1P39086 AL121912.1-201ENST00000603683 238 ntBASIC18.82■□□□□ 0.6
GRIK1P39086 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.82■□□□□ 0.6
GRIK1P39086 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC18.82■□□□□ 0.6
GRIK1P39086 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
GRIK1P39086 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
GRIK1P39086 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.82■□□□□ 0.6
GRIK1P39086 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.82■□□□□ 0.6
GRIK1P39086 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.82■□□□□ 0.6
GRIK1P39086 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.82■□□□□ 0.6
GRIK1P39086 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GRIK1P39086 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GRIK1P39086 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GRIK1P39086 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GRIK1P39086 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GRIK1P39086 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GRIK1P39086 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GRIK1P39086 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.81■□□□□ 0.6
GRIK1P39086 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GRIK1P39086 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
GRIK1P39086 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.81■□□□□ 0.6
GRIK1P39086 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GRIK1P39086 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GRIK1P39086 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GRIK1P39086 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GRIK1P39086 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GRIK1P39086 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.81■□□□□ 0.6
GRIK1P39086 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.81■□□□□ 0.6
GRIK1P39086 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GRIK1P39086 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.81■□□□□ 0.6
GRIK1P39086 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GRIK1P39086 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.81■□□□□ 0.6
GRIK1P39086 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.81■□□□□ 0.6
GRIK1P39086 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.81■□□□□ 0.6
GRIK1P39086 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.81■□□□□ 0.6
GRIK1P39086 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GRIK1P39086 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
GRIK1P39086 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GRIK1P39086 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GRIK1P39086 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.81■□□□□ 0.6
GRIK1P39086 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GRIK1P39086 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
GRIK1P39086 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
GRIK1P39086 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
GRIK1P39086 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.8■□□□□ 0.6
GRIK1P39086 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.8■□□□□ 0.6
GRIK1P39086 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GRIK1P39086 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GRIK1P39086 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GRIK1P39086 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GRIK1P39086 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.8■□□□□ 0.6
GRIK1P39086 AC007967.3-201ENST00000434308 558 ntBASIC18.8■□□□□ 0.6
GRIK1P39086 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.8■□□□□ 0.6
GRIK1P39086 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.8■□□□□ 0.6
GRIK1P39086 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GRIK1P39086 AL160237.2-201ENST00000556165 472 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms