Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.27■□□□□ 0.68
HOXA11P31270 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.27■□□□□ 0.68
HOXA11P31270 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.27■□□□□ 0.68
HOXA11P31270 AC019129.2-201ENST00000609837 1235 ntBASIC19.27■□□□□ 0.68
HOXA11P31270 AC073592.5-201ENST00000624854 528 ntBASIC19.27■□□□□ 0.68
HOXA11P31270 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HOXA11P31270 AC132938.5-201ENST00000624980 1813 ntBASIC19.27■□□□□ 0.68
HOXA11P31270 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
HOXA11P31270 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
HOXA11P31270 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
HOXA11P31270 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
HOXA11P31270 BICD1-207ENST00000551848 1962 ntBASIC19.26■□□□□ 0.67
HOXA11P31270 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.26■□□□□ 0.67
HOXA11P31270 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.26■□□□□ 0.67
HOXA11P31270 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA11P31270 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HOXA11P31270 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HOXA11P31270 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.26■□□□□ 0.67
HOXA11P31270 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.26■□□□□ 0.67
HOXA11P31270 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.26■□□□□ 0.67
HOXA11P31270 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA11P31270 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.26■□□□□ 0.67
HOXA11P31270 IGHV3-22-201ENST00000520721 359 ntBASIC19.26■□□□□ 0.67
HOXA11P31270 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.26■□□□□ 0.67
HOXA11P31270 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.26■□□□□ 0.67
HOXA11P31270 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.26■□□□□ 0.67
HOXA11P31270 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.26■□□□□ 0.67
HOXA11P31270 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.26■□□□□ 0.67
HOXA11P31270 AC107918.4-202ENST00000641623 219 ntBASIC19.26■□□□□ 0.67
HOXA11P31270 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HOXA11P31270 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.26■□□□□ 0.67
HOXA11P31270 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA11P31270 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA11P31270 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HOXA11P31270 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HOXA11P31270 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.26■□□□□ 0.67
HOXA11P31270 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXA11P31270 FLJ13224-201ENST00000313737 1514 ntBASIC19.25■□□□□ 0.67
HOXA11P31270 KRT18P55-202ENST00000578578 1546 ntBASIC19.25■□□□□ 0.67
HOXA11P31270 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA11P31270 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXA11P31270 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA11P31270 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA11P31270 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA11P31270 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA11P31270 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA11P31270 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA11P31270 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA11P31270 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA11P31270 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA11P31270 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA11P31270 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA11P31270 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA11P31270 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.25■□□□□ 0.67
HOXA11P31270 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HOXA11P31270 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXA11P31270 DDX43P3-201ENST00000441064 443 ntBASIC19.25■□□□□ 0.67
HOXA11P31270 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HOXA11P31270 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA11P31270 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXA11P31270 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.25■□□□□ 0.67
HOXA11P31270 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXA11P31270 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXA11P31270 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.25■□□□□ 0.67
HOXA11P31270 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.25■□□□□ 0.67
HOXA11P31270 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA11P31270 AC116407.2-201ENST00000613639 860 ntBASIC19.25■□□□□ 0.67
HOXA11P31270 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.25■□□□□ 0.67
HOXA11P31270 AL022326.1-202ENST00000641533 845 ntBASIC19.25■□□□□ 0.67
HOXA11P31270 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA11P31270 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.25■□□□□ 0.67
HOXA11P31270 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.25■□□□□ 0.67
HOXA11P31270 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HOXA11P31270 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA11P31270 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA11P31270 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA11P31270 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA11P31270 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXA11P31270 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA11P31270 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA11P31270 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA11P31270 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXA11P31270 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA11P31270 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA11P31270 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
HOXA11P31270 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA11P31270 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXA11P31270 RPL13AP23-201ENST00000480739 586 ntBASIC19.24■□□□□ 0.67
HOXA11P31270 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.24■□□□□ 0.67
HOXA11P31270 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXA11P31270 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXA11P31270 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.24■□□□□ 0.67
HOXA11P31270 AC106730.1-201ENST00000566722 1090 ntBASIC19.24■□□□□ 0.67
HOXA11P31270 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA11P31270 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HOXA11P31270 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXA11P31270 AC008735.5-201ENST00000623544 497 ntBASIC19.24■□□□□ 0.67
HOXA11P31270 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.24■□□□□ 0.67
HOXA11P31270 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.24■□□□□ 0.67
HOXA11P31270 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms