Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DRAP01903 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DRAP01903 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DRAP01903 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HLA-DRAP01903 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HLA-DRAP01903 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.23■□□□□ 0.67
HLA-DRAP01903 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-DRAP01903 UPK3BP1-201ENST00000428678 509 ntBASIC19.23■□□□□ 0.67
HLA-DRAP01903 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-DRAP01903 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-DRAP01903 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DRAP01903 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DRAP01903 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DRAP01903 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DRAP01903 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DRAP01903 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
HLA-DRAP01903 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DRAP01903 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
HLA-DRAP01903 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DRAP01903 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-DRAP01903 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HLA-DRAP01903 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
HLA-DRAP01903 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-DRAP01903 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.23■□□□□ 0.67
HLA-DRAP01903 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DRAP01903 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DRAP01903 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DRAP01903 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DRAP01903 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DRAP01903 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.22■□□□□ 0.67
HLA-DRAP01903 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DRAP01903 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HLA-DRAP01903 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DRAP01903 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
HLA-DRAP01903 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DRAP01903 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DRAP01903 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DRAP01903 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.22■□□□□ 0.67
HLA-DRAP01903 DRAXINP1-201ENST00000437611 948 ntBASIC19.22■□□□□ 0.67
HLA-DRAP01903 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.22■□□□□ 0.67
HLA-DRAP01903 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.22■□□□□ 0.67
HLA-DRAP01903 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DRAP01903 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.22■□□□□ 0.67
HLA-DRAP01903 AP005901.3-202ENST00000581653 237 ntBASIC19.22■□□□□ 0.67
HLA-DRAP01903 AC005336.2-201ENST00000593183 939 ntBASIC19.22■□□□□ 0.67
HLA-DRAP01903 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.22■□□□□ 0.67
HLA-DRAP01903 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DRAP01903 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
HLA-DRAP01903 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DRAP01903 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DRAP01903 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DRAP01903 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
HLA-DRAP01903 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.22■□□□□ 0.67
HLA-DRAP01903 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DRAP01903 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DRAP01903 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DRAP01903 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DRAP01903 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DRAP01903 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.21■□□□□ 0.67
HLA-DRAP01903 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DRAP01903 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DRAP01903 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DRAP01903 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
HLA-DRAP01903 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DRAP01903 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
HLA-DRAP01903 ATP5G2P1-201ENST00000433580 426 ntBASIC19.21■□□□□ 0.67
HLA-DRAP01903 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.21■□□□□ 0.67
HLA-DRAP01903 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DRAP01903 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.21■□□□□ 0.67
HLA-DRAP01903 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.21■□□□□ 0.67
HLA-DRAP01903 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
HLA-DRAP01903 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.21■□□□□ 0.67
HLA-DRAP01903 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.21■□□□□ 0.67
HLA-DRAP01903 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.21■□□□□ 0.67
HLA-DRAP01903 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.21■□□□□ 0.67
HLA-DRAP01903 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DRAP01903 AC092119.3-201ENST00000612618 583 ntBASIC19.21■□□□□ 0.67
HLA-DRAP01903 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.21■□□□□ 0.67
HLA-DRAP01903 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DRAP01903 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DRAP01903 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
HLA-DRAP01903 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
HLA-DRAP01903 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
HLA-DRAP01903 AC233702.3-201ENST00000578656 1387 ntBASIC19.2■□□□□ 0.66
HLA-DRAP01903 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DRAP01903 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DRAP01903 GNAS-203ENST00000306120 1878 ntBASIC19.2■□□□□ 0.66
HLA-DRAP01903 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DRAP01903 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DRAP01903 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.2■□□□□ 0.66
HLA-DRAP01903 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DRAP01903 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
HLA-DRAP01903 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.2■□□□□ 0.66
HLA-DRAP01903 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.2■□□□□ 0.66
HLA-DRAP01903 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DRAP01903 AC246785.2-201ENST00000432512 513 ntBASIC19.2■□□□□ 0.66
HLA-DRAP01903 TOB2P1-201ENST00000469761 992 ntBASIC19.2■□□□□ 0.66
HLA-DRAP01903 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
HLA-DRAP01903 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.2■□□□□ 0.66
HLA-DRAP01903 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms