Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PFDN1O60925 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.99■□□□□ 0.15
PFDN1O60925 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
PFDN1O60925 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.99■□□□□ 0.15
PFDN1O60925 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.99■□□□□ 0.15
PFDN1O60925 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PFDN1O60925 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.99■□□□□ 0.15
PFDN1O60925 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 AC138035.3-201ENST00000622706 2791 ntBASIC15.99■□□□□ 0.15
PFDN1O60925 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PFDN1O60925 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 SDHAP1-207ENST00000440850 2000 ntBASIC15.99■□□□□ 0.15
PFDN1O60925 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PFDN1O60925 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PFDN1O60925 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.98■□□□□ 0.15
PFDN1O60925 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PFDN1O60925 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PFDN1O60925 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
PFDN1O60925 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC15.98■□□□□ 0.15
PFDN1O60925 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC15.98■□□□□ 0.15
PFDN1O60925 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PFDN1O60925 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PFDN1O60925 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.98■□□□□ 0.15
PFDN1O60925 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PFDN1O60925 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PFDN1O60925 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PFDN1O60925 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PFDN1O60925 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.97■□□□□ 0.15
PFDN1O60925 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
PFDN1O60925 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PFDN1O60925 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PFDN1O60925 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PFDN1O60925 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PFDN1O60925 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PFDN1O60925 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PFDN1O60925 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.97■□□□□ 0.15
PFDN1O60925 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.97■□□□□ 0.15
PFDN1O60925 ATP5G2P3-201ENST00000429083 425 ntBASIC15.97■□□□□ 0.15
PFDN1O60925 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC15.97■□□□□ 0.15
PFDN1O60925 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.97■□□□□ 0.15
PFDN1O60925 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PFDN1O60925 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PFDN1O60925 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PFDN1O60925 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PFDN1O60925 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
PFDN1O60925 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PFDN1O60925 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PFDN1O60925 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PFDN1O60925 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PFDN1O60925 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PFDN1O60925 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PFDN1O60925 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.97■□□□□ 0.15
PFDN1O60925 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PFDN1O60925 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PFDN1O60925 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PFDN1O60925 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PFDN1O60925 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
PFDN1O60925 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC15.97■□□□□ 0.15
PFDN1O60925 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms