Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SMAD9O15198 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.26■□□□□ 0.19
SMAD9O15198 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.26■□□□□ 0.19
SMAD9O15198 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.26■□□□□ 0.19
SMAD9O15198 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.26■□□□□ 0.19
SMAD9O15198 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SMAD9O15198 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.26■□□□□ 0.19
SMAD9O15198 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.26■□□□□ 0.19
SMAD9O15198 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.26■□□□□ 0.19
SMAD9O15198 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SMAD9O15198 AC116407.4-201ENST00000623319 1061 ntBASIC16.26■□□□□ 0.19
SMAD9O15198 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SMAD9O15198 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.26■□□□□ 0.19
SMAD9O15198 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
SMAD9O15198 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.26■□□□□ 0.19
SMAD9O15198 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 PHGDH-209ENST00000641074 1780 ntBASIC16.26■□□□□ 0.19
SMAD9O15198 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SMAD9O15198 IER3-202ENST00000376377 1350 ntBASIC16.26■□□□□ 0.19
SMAD9O15198 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.25■□□□□ 0.19
SMAD9O15198 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.25■□□□□ 0.19
SMAD9O15198 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.25■□□□□ 0.19
SMAD9O15198 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD9O15198 AC135776.1-201ENST00000319817 2481 ntBASIC16.25■□□□□ 0.19
SMAD9O15198 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD9O15198 AC093677.2-201ENST00000600169 1863 ntBASIC16.25■□□□□ 0.19
SMAD9O15198 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
SMAD9O15198 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD9O15198 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD9O15198 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD9O15198 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SMAD9O15198 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SMAD9O15198 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SMAD9O15198 IGHGP-201ENST00000390555 1178 ntBASIC16.25■□□□□ 0.19
SMAD9O15198 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.25■□□□□ 0.19
SMAD9O15198 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.25■□□□□ 0.19
SMAD9O15198 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD9O15198 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.25■□□□□ 0.19
SMAD9O15198 AC113404.2-201ENST00000507884 177 ntBASIC16.25■□□□□ 0.19
SMAD9O15198 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.25■□□□□ 0.19
SMAD9O15198 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.25■□□□□ 0.19
SMAD9O15198 AP000550.4-202ENST00000639755 178 ntBASIC16.25■□□□□ 0.19
SMAD9O15198 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SMAD9O15198 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD9O15198 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD9O15198 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SMAD9O15198 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SMAD9O15198 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SMAD9O15198 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD9O15198 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD9O15198 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD9O15198 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SMAD9O15198 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
SMAD9O15198 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD9O15198 AC067852.2-201ENST00000590513 2313 ntBASIC16.24■□□□□ 0.19
SMAD9O15198 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD9O15198 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD9O15198 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD9O15198 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD9O15198 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.24■□□□□ 0.19
SMAD9O15198 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD9O15198 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.24■□□□□ 0.19
SMAD9O15198 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD9O15198 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.24■□□□□ 0.19
SMAD9O15198 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD9O15198 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD9O15198 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.24■□□□□ 0.19
SMAD9O15198 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.24■□□□□ 0.19
SMAD9O15198 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.24■□□□□ 0.19
SMAD9O15198 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.24■□□□□ 0.19
SMAD9O15198 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SMAD9O15198 AC005332.3-201ENST00000589904 676 ntBASIC16.24■□□□□ 0.19
SMAD9O15198 AC011498.5-201ENST00000592027 486 ntBASIC16.24■□□□□ 0.19
SMAD9O15198 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD9O15198 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SMAD9O15198 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms