Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
UPK1AO00322 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
UPK1AO00322 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1AO00322 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1AO00322 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1AO00322 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
UPK1AO00322 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1AO00322 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1AO00322 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
UPK1AO00322 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
UPK1AO00322 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1AO00322 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.97■□□□□ 0.31
UPK1AO00322 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.97■□□□□ 0.31
UPK1AO00322 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.97■□□□□ 0.31
UPK1AO00322 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.97■□□□□ 0.31
UPK1AO00322 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1AO00322 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1AO00322 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1AO00322 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1AO00322 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1AO00322 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1AO00322 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
UPK1AO00322 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1AO00322 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
UPK1AO00322 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
UPK1AO00322 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
UPK1AO00322 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1AO00322 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.96■□□□□ 0.31
UPK1AO00322 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
UPK1AO00322 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1AO00322 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
UPK1AO00322 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1AO00322 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1AO00322 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1AO00322 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1AO00322 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1AO00322 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1AO00322 RNF152P1-201ENST00000397754 604 ntBASIC16.96■□□□□ 0.31
UPK1AO00322 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1AO00322 TSPY5P-201ENST00000426936 936 ntBASIC16.96■□□□□ 0.31
UPK1AO00322 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.96■□□□□ 0.31
UPK1AO00322 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.96■□□□□ 0.31
UPK1AO00322 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.96■□□□□ 0.31
UPK1AO00322 AC008687.5-201ENST00000593746 558 ntBASIC16.96■□□□□ 0.31
UPK1AO00322 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.96■□□□□ 0.31
UPK1AO00322 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.96■□□□□ 0.31
UPK1AO00322 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1AO00322 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
UPK1AO00322 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
UPK1AO00322 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.96■□□□□ 0.31
UPK1AO00322 AL391807.1-203ENST00000604392 2365 ntBASIC16.96■□□□□ 0.31
UPK1AO00322 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.96■□□□□ 0.3
UPK1AO00322 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
UPK1AO00322 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
UPK1AO00322 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.3
UPK1AO00322 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
UPK1AO00322 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
UPK1AO00322 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.3
UPK1AO00322 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UPK1AO00322 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.95■□□□□ 0.3
UPK1AO00322 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1AO00322 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
UPK1AO00322 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1AO00322 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1AO00322 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UPK1AO00322 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.95■□□□□ 0.3
UPK1AO00322 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1AO00322 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1AO00322 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1AO00322 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.95■□□□□ 0.3
UPK1AO00322 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1AO00322 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
UPK1AO00322 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.95■□□□□ 0.3
UPK1AO00322 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UPK1AO00322 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1AO00322 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1AO00322 AL136038.4-201ENST00000603606 1261 ntBASIC16.95■□□□□ 0.3
UPK1AO00322 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1AO00322 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1AO00322 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1AO00322 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.95■□□□□ 0.3
UPK1AO00322 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
UPK1AO00322 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
UPK1AO00322 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.95■□□□□ 0.3
UPK1AO00322 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
UPK1AO00322 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
UPK1AO00322 AC132938.6-201ENST00000623828 1655 ntBASIC16.94■□□□□ 0.3
UPK1AO00322 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.94■□□□□ 0.3
UPK1AO00322 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.94■□□□□ 0.3
UPK1AO00322 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.94■□□□□ 0.3
UPK1AO00322 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.94■□□□□ 0.3
UPK1AO00322 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.94■□□□□ 0.3
UPK1AO00322 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
UPK1AO00322 RCN1P1-201ENST00000400413 996 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms