Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.57■□□□□ 0.4
CDC7O00311 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.57■□□□□ 0.4
CDC7O00311 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
CDC7O00311 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDC7O00311 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.57■□□□□ 0.4
CDC7O00311 HYMAI.1-201ENST00000620949 238 ntBASIC17.57■□□□□ 0.4
CDC7O00311 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC7O00311 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.57■□□□□ 0.4
CDC7O00311 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.57■□□□□ 0.4
CDC7O00311 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDC7O00311 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDC7O00311 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CDC7O00311 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDC7O00311 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CDC7O00311 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.57■□□□□ 0.4
CDC7O00311 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC7O00311 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CDC7O00311 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CDC7O00311 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDC7O00311 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC7O00311 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDC7O00311 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CDC7O00311 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC7O00311 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC7O00311 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CDC7O00311 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC7O00311 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.56■□□□□ 0.4
CDC7O00311 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC7O00311 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.56■□□□□ 0.4
CDC7O00311 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.56■□□□□ 0.4
CDC7O00311 HOMER2P1-201ENST00000455653 964 ntBASIC17.56■□□□□ 0.4
CDC7O00311 VENTXP5-201ENST00000523979 775 ntBASIC17.56■□□□□ 0.4
CDC7O00311 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.56■□□□□ 0.4
CDC7O00311 ZNF444P1-201ENST00000559497 298 ntBASIC17.56■□□□□ 0.4
CDC7O00311 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.56■□□□□ 0.4
CDC7O00311 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.56■□□□□ 0.4
CDC7O00311 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC7O00311 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC7O00311 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC7O00311 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.56■□□□□ 0.4
CDC7O00311 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC7O00311 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDC7O00311 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.56■□□□□ 0.4
CDC7O00311 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.55■□□□□ 0.4
CDC7O00311 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC7O00311 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC7O00311 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC7O00311 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.55■□□□□ 0.4
CDC7O00311 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC7O00311 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC7O00311 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDC7O00311 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC7O00311 MIR662-201ENST00000384847 95 ntBASIC17.55■□□□□ 0.4
CDC7O00311 IGHGP-201ENST00000390555 1178 ntBASIC17.55■□□□□ 0.4
CDC7O00311 TSPY12P-201ENST00000421279 868 ntBASIC17.55■□□□□ 0.4
CDC7O00311 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.55■□□□□ 0.4
CDC7O00311 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.55■□□□□ 0.4
CDC7O00311 AP003733.1-201ENST00000491725 852 ntBASIC17.55■□□□□ 0.4
CDC7O00311 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.55■□□□□ 0.4
CDC7O00311 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.55■□□□□ 0.4
CDC7O00311 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.55■□□□□ 0.4
CDC7O00311 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.55■□□□□ 0.4
CDC7O00311 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CDC7O00311 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDC7O00311 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC7O00311 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC7O00311 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.55■□□□□ 0.4
CDC7O00311 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CDC7O00311 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.55■□□□□ 0.4
CDC7O00311 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDC7O00311 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDC7O00311 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC7O00311 AL645608.8-201ENST00000606034 2086 ntBASIC17.54■□□□□ 0.4
CDC7O00311 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.54■□□□□ 0.4
CDC7O00311 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC7O00311 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.54■□□□□ 0.4
CDC7O00311 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.54■□□□□ 0.4
CDC7O00311 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.54■□□□□ 0.4
CDC7O00311 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.54■□□□□ 0.4
CDC7O00311 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDC7O00311 RCN1P1-201ENST00000400413 996 ntBASIC17.54■□□□□ 0.4
CDC7O00311 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDC7O00311 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.54■□□□□ 0.4
CDC7O00311 AC092647.4-201ENST00000457211 535 ntBASIC17.54■□□□□ 0.4
CDC7O00311 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.54■□□□□ 0.4
CDC7O00311 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC7O00311 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.54■□□□□ 0.4
CDC7O00311 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.54■□□□□ 0.4
CDC7O00311 AC009154.2-201ENST00000621177 724 ntBASIC17.54■□□□□ 0.4
CDC7O00311 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CDC7O00311 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC7O00311 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDC7O00311 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC7O00311 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDC7O00311 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.54■□□□□ 0.4
CDC7O00311 LINC01311-201ENST00000565162 1445 ntBASIC17.54■□□□□ 0.4
CDC7O00311 AC141586.5-201ENST00000624546 2050 ntBASIC17.54■□□□□ 0.4
CDC7O00311 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
CDC7O00311 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDC7O00311 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms