Protein–RNA interactions for Protein: C9JVI0

USP17L11, Ubiquitin carboxyl-terminal hydrolase 17-like protein 11, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L11C9JVI0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 RNA5SP415-201ENST00000517246 115 ntBASIC20.68■□□□□ 0.9
USP17L11C9JVI0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 AC140113.2-201ENST00000604370 208 ntBASIC20.68■□□□□ 0.9
USP17L11C9JVI0 Z83851.2-201ENST00000609564 659 ntBASIC20.68■□□□□ 0.9
USP17L11C9JVI0 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
USP17L11C9JVI0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
USP17L11C9JVI0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.66■□□□□ 0.9
USP17L11C9JVI0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
USP17L11C9JVI0 AL020996.1-203ENST00000536896 2307 ntBASIC20.66■□□□□ 0.9
USP17L11C9JVI0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.66■□□□□ 0.9
USP17L11C9JVI0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
USP17L11C9JVI0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP17L11C9JVI0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP17L11C9JVI0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP17L11C9JVI0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP17L11C9JVI0 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.66■□□□□ 0.9
USP17L11C9JVI0 MED15P5-201ENST00000423150 992 ntBASIC20.66■□□□□ 0.9
USP17L11C9JVI0 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.66■□□□□ 0.9
USP17L11C9JVI0 AL591424.1-201ENST00000442569 1213 ntBASIC20.66■□□□□ 0.9
USP17L11C9JVI0 AC122714.2-201ENST00000502787 707 ntBASIC20.66■□□□□ 0.9
USP17L11C9JVI0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.66■□□□□ 0.9
USP17L11C9JVI0 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP17L11C9JVI0 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.66■□□□□ 0.9
USP17L11C9JVI0 AL356488.2-201ENST00000602755 427 ntBASIC20.66■□□□□ 0.9
USP17L11C9JVI0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
USP17L11C9JVI0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC20.66■□□□□ 0.9
USP17L11C9JVI0 AC079776.2-201ENST00000641154 1609 ntBASIC20.66■□□□□ 0.9
USP17L11C9JVI0 AL096828.2-201ENST00000567259 1965 ntBASIC20.66■□□□□ 0.9
USP17L11C9JVI0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP17L11C9JVI0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP17L11C9JVI0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP17L11C9JVI0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 AC093010.1-201ENST00000473625 1624 ntBASIC20.65■□□□□ 0.9
USP17L11C9JVI0 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 PMPCAP1-201ENST00000508114 1576 ntBASIC20.65■□□□□ 0.9
USP17L11C9JVI0 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 LAGE3P1-201ENST00000425356 484 ntBASIC20.65■□□□□ 0.9
USP17L11C9JVI0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.65■□□□□ 0.9
USP17L11C9JVI0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms