Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
SHISA3A0PJX4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 RARRES2P10-201ENST00000564312 460 ntBASIC15.59■□□□□ 0.09
SHISA3A0PJX4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 LINC01451-201ENST00000623792 534 ntBASIC15.59■□□□□ 0.09
SHISA3A0PJX4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 AL603756.1-201ENST00000606511 2163 ntBASIC15.59■□□□□ 0.09
SHISA3A0PJX4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SHISA3A0PJX4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
SHISA3A0PJX4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
SHISA3A0PJX4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.58■□□□□ 0.09
SHISA3A0PJX4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SHISA3A0PJX4 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SHISA3A0PJX4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
SHISA3A0PJX4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SHISA3A0PJX4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SHISA3A0PJX4 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 PCDHA1-201ENST00000378133 2726 ntBASIC15.58■□□□□ 0.08
SHISA3A0PJX4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 MFAP1P1-201ENST00000442257 1255 ntBASIC15.58■□□□□ 0.08
SHISA3A0PJX4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 RN7SL471P-201ENST00000580476 299 ntBASIC15.58■□□□□ 0.08
SHISA3A0PJX4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SHISA3A0PJX4 AC116353.5-201ENST00000638148 1699 ntBASIC15.57■□□□□ 0.08
SHISA3A0PJX4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
SHISA3A0PJX4 AF186192.3-201ENST00000583427 947 ntBASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms