Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC009949.1-201ENST00000623048 1830 ntBASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 MIR3180-4-201ENST00000582223 153 ntBASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TCRBV3S1A0A5B6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 AC005915.1-201ENST00000624912 2018 ntBASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 AL353807.1-201ENST00000427475 662 ntBASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 AC011270.2-201ENST00000624293 2550 ntBASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TCRBV3S1A0A5B6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 CA15P1-201ENST00000481698 905 ntBASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 AC116407.2-201ENST00000613639 860 ntBASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TCRBV3S1A0A5B6 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TCRBV3S1A0A5B6 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms