Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AL645929.1-201ENST00000420084 975 ntBASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 LINC00304-203ENST00000565008 1864 ntBASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AL645608.8-201ENST00000606034 2086 ntBASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AC141586.5-201ENST00000624546 2050 ntBASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 FAM210CP-201ENST00000445714 574 ntBASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 MTCL1P1-201ENST00000446207 792 ntBASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 AL031133.1-201ENST00000406807 723 ntBASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 LINC01238-205ENST00000567549 1107 ntBASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 NTF6B-201ENST00000591913 560 ntBASIC15.78■□□□□ 0.12
IGKV1D-43A0A0B4J1Z2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms