Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 CHCHD2P8-201ENST00000429873 447 ntBASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 GUSBP12-201ENST00000513727 720 ntBASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AC092329.2-201ENST00000598402 547 ntBASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.3■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AC068472.1-201ENST00000474589 881 ntBASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AP002414.4-201ENST00000589764 1148 ntBASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AC008764.6-201ENST00000595909 2069 ntBASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 MTCL1P1-201ENST00000446207 792 ntBASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AC090616.6-201ENST00000582640 721 ntBASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.27■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.27■□□□□ 0.2
TNFSF12-TNFSF13A0A0A6YY99 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms