Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
BIVM-ERCC5R4GMW8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
BIVM-ERCC5R4GMW8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
BIVM-ERCC5R4GMW8 PNMT-202ENST00000394246 821 ntTSL 2 BASIC29.58■■■□□ 2.33
BIVM-ERCC5R4GMW8 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC29.58■■■□□ 2.33
BIVM-ERCC5R4GMW8 CNN2P11-201ENST00000429351 262 ntBASIC29.58■■■□□ 2.33
BIVM-ERCC5R4GMW8 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC29.58■■■□□ 2.33
BIVM-ERCC5R4GMW8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC29.58■■■□□ 2.33
BIVM-ERCC5R4GMW8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC29.58■■■□□ 2.33
BIVM-ERCC5R4GMW8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
BIVM-ERCC5R4GMW8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
BIVM-ERCC5R4GMW8 GOLGA6L17P-202ENST00000614358 1398 ntBASIC29.58■■■□□ 2.33
BIVM-ERCC5R4GMW8 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC29.57■■■□□ 2.32
BIVM-ERCC5R4GMW8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC29.57■■■□□ 2.32
BIVM-ERCC5R4GMW8 STOM-202ENST00000347359 870 ntTSL 2 BASIC29.57■■■□□ 2.32
BIVM-ERCC5R4GMW8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC29.57■■■□□ 2.32
BIVM-ERCC5R4GMW8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC29.57■■■□□ 2.32
BIVM-ERCC5R4GMW8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
BIVM-ERCC5R4GMW8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
BIVM-ERCC5R4GMW8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC29.57■■■□□ 2.32
BIVM-ERCC5R4GMW8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC29.57■■■□□ 2.32
BIVM-ERCC5R4GMW8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC29.57■■■□□ 2.32
BIVM-ERCC5R4GMW8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
BIVM-ERCC5R4GMW8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC29.56■■■□□ 2.32
BIVM-ERCC5R4GMW8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
BIVM-ERCC5R4GMW8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
BIVM-ERCC5R4GMW8 AC002558.1-201ENST00000488906 803 ntBASIC29.56■■■□□ 2.32
BIVM-ERCC5R4GMW8 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
BIVM-ERCC5R4GMW8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
BIVM-ERCC5R4GMW8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC29.56■■■□□ 2.32
BIVM-ERCC5R4GMW8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
BIVM-ERCC5R4GMW8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
BIVM-ERCC5R4GMW8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC29.56■■■□□ 2.32
BIVM-ERCC5R4GMW8 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC29.56■■■□□ 2.32
BIVM-ERCC5R4GMW8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC29.56■■■□□ 2.32
BIVM-ERCC5R4GMW8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
BIVM-ERCC5R4GMW8 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
BIVM-ERCC5R4GMW8 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC29.56■■■□□ 2.32
BIVM-ERCC5R4GMW8 AL031432.2-201ENST00000566714 459 ntBASIC29.56■■■□□ 2.32
BIVM-ERCC5R4GMW8 AL928711.1-201ENST00000570165 459 ntBASIC29.56■■■□□ 2.32
BIVM-ERCC5R4GMW8 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
BIVM-ERCC5R4GMW8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
BIVM-ERCC5R4GMW8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC29.55■■■□□ 2.32
BIVM-ERCC5R4GMW8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC29.55■■■□□ 2.32
BIVM-ERCC5R4GMW8 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC29.55■■■□□ 2.32
BIVM-ERCC5R4GMW8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC29.55■■■□□ 2.32
BIVM-ERCC5R4GMW8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
BIVM-ERCC5R4GMW8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC29.55■■■□□ 2.32
BIVM-ERCC5R4GMW8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC29.55■■■□□ 2.32
BIVM-ERCC5R4GMW8 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC29.55■■■□□ 2.32
BIVM-ERCC5R4GMW8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC29.55■■■□□ 2.32
BIVM-ERCC5R4GMW8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC29.55■■■□□ 2.32
BIVM-ERCC5R4GMW8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC29.55■■■□□ 2.32
BIVM-ERCC5R4GMW8 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC29.55■■■□□ 2.32
BIVM-ERCC5R4GMW8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
BIVM-ERCC5R4GMW8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
BIVM-ERCC5R4GMW8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
BIVM-ERCC5R4GMW8 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
BIVM-ERCC5R4GMW8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC29.54■■■□□ 2.32
BIVM-ERCC5R4GMW8 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC29.54■■■□□ 2.32
BIVM-ERCC5R4GMW8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC29.54■■■□□ 2.32
BIVM-ERCC5R4GMW8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC29.54■■■□□ 2.32
BIVM-ERCC5R4GMW8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
BIVM-ERCC5R4GMW8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
BIVM-ERCC5R4GMW8 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
BIVM-ERCC5R4GMW8 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
BIVM-ERCC5R4GMW8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
BIVM-ERCC5R4GMW8 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC29.54■■■□□ 2.32
BIVM-ERCC5R4GMW8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
BIVM-ERCC5R4GMW8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
BIVM-ERCC5R4GMW8 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
BIVM-ERCC5R4GMW8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC29.53■■■□□ 2.32
BIVM-ERCC5R4GMW8 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
BIVM-ERCC5R4GMW8 ORC5-208ENST00000626700 344 ntTSL 3 BASIC29.53■■■□□ 2.32
BIVM-ERCC5R4GMW8 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
BIVM-ERCC5R4GMW8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC29.53■■■□□ 2.32
BIVM-ERCC5R4GMW8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC29.53■■■□□ 2.32
BIVM-ERCC5R4GMW8 KRT18P28-201ENST00000453838 1332 ntBASIC29.53■■■□□ 2.32
BIVM-ERCC5R4GMW8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
BIVM-ERCC5R4GMW8 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC29.53■■■□□ 2.32
BIVM-ERCC5R4GMW8 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
BIVM-ERCC5R4GMW8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC29.53■■■□□ 2.32
BIVM-ERCC5R4GMW8 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
BIVM-ERCC5R4GMW8 PON3-203ENST00000427422 894 ntTSL 3 BASIC29.53■■■□□ 2.32
BIVM-ERCC5R4GMW8 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC29.52■■■□□ 2.32
BIVM-ERCC5R4GMW8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC29.52■■■□□ 2.32
BIVM-ERCC5R4GMW8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC29.52■■■□□ 2.32
BIVM-ERCC5R4GMW8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC29.52■■■□□ 2.32
BIVM-ERCC5R4GMW8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC29.52■■■□□ 2.32
BIVM-ERCC5R4GMW8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
BIVM-ERCC5R4GMW8 CD82-202ENST00000342935 967 ntTSL 5 BASIC29.52■■■□□ 2.32
BIVM-ERCC5R4GMW8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC29.52■■■□□ 2.32
BIVM-ERCC5R4GMW8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC29.52■■■□□ 2.32
BIVM-ERCC5R4GMW8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC29.52■■■□□ 2.32
BIVM-ERCC5R4GMW8 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC29.52■■■□□ 2.32
BIVM-ERCC5R4GMW8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC29.52■■■□□ 2.32
BIVM-ERCC5R4GMW8 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC29.52■■■□□ 2.32
BIVM-ERCC5R4GMW8 AC068137.2-201ENST00000605408 478 ntBASIC29.52■■■□□ 2.32
BIVM-ERCC5R4GMW8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
BIVM-ERCC5R4GMW8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms