Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN10AQ9Y5Y9 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 PRSS29P-201ENST00000440800 595 ntBASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 VN2R19P-201ENST00000442399 1052 ntBASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 AC009336.1-201ENST00000608941 1553 ntBASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 MRPL20P1-201ENST00000400819 433 ntBASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 SIGLEC30P-201ENST00000455569 941 ntBASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 PDPK2P-202ENST00000562415 1191 ntBASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN10AQ9Y5Y9 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 ACTG1P4-201ENST00000425123 1122 ntBASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 AL596442.2-201ENST00000610240 980 ntBASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 AC079781.4-201ENST00000641908 219 ntBASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 ELL2P1-201ENST00000413990 1906 ntBASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.45■□□□□ 0.7
SCN10AQ9Y5Y9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 STK19B-204ENST00000512515 211 ntBASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN10AQ9Y5Y9 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 AP002414.1-201ENST00000391405 1147 ntBASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SCN10AQ9Y5Y9 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms