Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
YIPF1Q9Y548 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 TNXA-203ENST00000507684 2038 ntBASIC18.63■□□□□ 0.57
YIPF1Q9Y548 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 SPDYE21P-201ENST00000413323 827 ntBASIC18.63■□□□□ 0.57
YIPF1Q9Y548 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 AC103564.2-201ENST00000432853 1299 ntBASIC18.63■□□□□ 0.57
YIPF1Q9Y548 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 AC105339.3-201ENST00000560043 636 ntBASIC18.63■□□□□ 0.57
YIPF1Q9Y548 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 AC145285.3-201ENST00000564603 959 ntBASIC18.63■□□□□ 0.57
YIPF1Q9Y548 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 AC073592.5-201ENST00000624854 528 ntBASIC18.63■□□□□ 0.57
YIPF1Q9Y548 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 SIRPAP1-201ENST00000448467 1770 ntBASIC18.63■□□□□ 0.57
YIPF1Q9Y548 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
YIPF1Q9Y548 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 MIR940-201ENST00000401276 94 ntBASIC18.62■□□□□ 0.57
YIPF1Q9Y548 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 RPP21-221ENST00000428040 594 ntTSL 2 BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 AP002414.3-201ENST00000589352 1468 ntBASIC18.62■□□□□ 0.57
YIPF1Q9Y548 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
YIPF1Q9Y548 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 AC100803.2-201ENST00000562459 1963 ntBASIC18.61■□□□□ 0.57
YIPF1Q9Y548 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.61■□□□□ 0.57
YIPF1Q9Y548 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 SIGLEC16-201ENST00000599858 1437 ntBASIC18.61■□□□□ 0.57
YIPF1Q9Y548 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.61■□□□□ 0.57
YIPF1Q9Y548 TERC-201ENST00000602385 541 ntBASIC18.61■□□□□ 0.57
YIPF1Q9Y548 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 AC004817.3-201ENST00000602957 2129 ntBASIC18.61■□□□□ 0.57
YIPF1Q9Y548 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
YIPF1Q9Y548 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
YIPF1Q9Y548 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YIPF1Q9Y548 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
YIPF1Q9Y548 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
YIPF1Q9Y548 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
YIPF1Q9Y548 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms