Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
STAG3Q9UJ98 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC25.6■■□□□ 1.69
STAG3Q9UJ98 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
STAG3Q9UJ98 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
STAG3Q9UJ98 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
STAG3Q9UJ98 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
STAG3Q9UJ98 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
STAG3Q9UJ98 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
STAG3Q9UJ98 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC25.6■■□□□ 1.69
STAG3Q9UJ98 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC25.6■■□□□ 1.69
STAG3Q9UJ98 PRSS29P-201ENST00000440800 595 ntBASIC25.6■■□□□ 1.69
STAG3Q9UJ98 RPS15P9-201ENST00000494093 319 ntBASIC25.6■■□□□ 1.69
STAG3Q9UJ98 IGHV3-65-201ENST00000523210 341 ntBASIC25.6■■□□□ 1.69
STAG3Q9UJ98 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC25.6■■□□□ 1.69
STAG3Q9UJ98 AC011467.4-201ENST00000594891 528 ntBASIC25.6■■□□□ 1.69
STAG3Q9UJ98 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
STAG3Q9UJ98 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
STAG3Q9UJ98 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC25.6■■□□□ 1.69
STAG3Q9UJ98 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC25.6■■□□□ 1.69
STAG3Q9UJ98 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC25.6■■□□□ 1.69
STAG3Q9UJ98 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC25.6■■□□□ 1.69
STAG3Q9UJ98 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
STAG3Q9UJ98 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
STAG3Q9UJ98 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC25.59■■□□□ 1.69
STAG3Q9UJ98 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC25.59■■□□□ 1.69
STAG3Q9UJ98 SIRPAP1-201ENST00000448467 1770 ntBASIC25.59■■□□□ 1.69
STAG3Q9UJ98 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
STAG3Q9UJ98 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC25.59■■□□□ 1.69
STAG3Q9UJ98 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
STAG3Q9UJ98 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
STAG3Q9UJ98 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC25.59■■□□□ 1.69
STAG3Q9UJ98 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
STAG3Q9UJ98 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC25.59■■□□□ 1.69
STAG3Q9UJ98 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC25.59■■□□□ 1.69
STAG3Q9UJ98 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC25.59■■□□□ 1.69
STAG3Q9UJ98 AC008667.4-201ENST00000607370 168 ntBASIC25.59■■□□□ 1.69
STAG3Q9UJ98 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC25.59■■□□□ 1.69
STAG3Q9UJ98 NCF1C-201ENST00000438382 1427 ntBASIC25.59■■□□□ 1.69
STAG3Q9UJ98 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC25.59■■□□□ 1.69
STAG3Q9UJ98 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
STAG3Q9UJ98 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC25.59■■□□□ 1.69
STAG3Q9UJ98 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
STAG3Q9UJ98 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
STAG3Q9UJ98 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
STAG3Q9UJ98 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
STAG3Q9UJ98 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC25.58■■□□□ 1.69
STAG3Q9UJ98 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC25.58■■□□□ 1.69
STAG3Q9UJ98 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC25.58■■□□□ 1.69
STAG3Q9UJ98 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC25.58■■□□□ 1.69
STAG3Q9UJ98 CFL1-212ENST00000531413 636 ntTSL 3 BASIC25.58■■□□□ 1.69
STAG3Q9UJ98 CCND1-203ENST00000536559 553 ntTSL 3 BASIC25.58■■□□□ 1.69
STAG3Q9UJ98 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC25.58■■□□□ 1.69
STAG3Q9UJ98 CD63-210ENST00000550776 870 ntTSL 5 BASIC25.58■■□□□ 1.69
STAG3Q9UJ98 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC25.58■■□□□ 1.69
STAG3Q9UJ98 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC25.58■■□□□ 1.69
STAG3Q9UJ98 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC25.58■■□□□ 1.69
STAG3Q9UJ98 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC25.58■■□□□ 1.69
STAG3Q9UJ98 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
STAG3Q9UJ98 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
STAG3Q9UJ98 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
STAG3Q9UJ98 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
STAG3Q9UJ98 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC25.58■■□□□ 1.68
STAG3Q9UJ98 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC25.58■■□□□ 1.68
STAG3Q9UJ98 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC25.58■■□□□ 1.68
STAG3Q9UJ98 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
STAG3Q9UJ98 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
STAG3Q9UJ98 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC25.57■■□□□ 1.68
STAG3Q9UJ98 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
STAG3Q9UJ98 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC25.57■■□□□ 1.68
STAG3Q9UJ98 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
STAG3Q9UJ98 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
STAG3Q9UJ98 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
STAG3Q9UJ98 COX5BP2-201ENST00000392354 334 ntBASIC25.57■■□□□ 1.68
STAG3Q9UJ98 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC25.57■■□□□ 1.68
STAG3Q9UJ98 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC25.57■■□□□ 1.68
STAG3Q9UJ98 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
STAG3Q9UJ98 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC25.57■■□□□ 1.68
STAG3Q9UJ98 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
STAG3Q9UJ98 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC25.57■■□□□ 1.68
STAG3Q9UJ98 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC25.57■■□□□ 1.68
STAG3Q9UJ98 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
STAG3Q9UJ98 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC25.57■■□□□ 1.68
STAG3Q9UJ98 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
STAG3Q9UJ98 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC25.56■■□□□ 1.68
STAG3Q9UJ98 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
STAG3Q9UJ98 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
STAG3Q9UJ98 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC25.56■■□□□ 1.68
STAG3Q9UJ98 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
STAG3Q9UJ98 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC25.56■■□□□ 1.68
STAG3Q9UJ98 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC25.56■■□□□ 1.68
STAG3Q9UJ98 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC25.56■■□□□ 1.68
STAG3Q9UJ98 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
STAG3Q9UJ98 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
STAG3Q9UJ98 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
STAG3Q9UJ98 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC25.56■■□□□ 1.68
STAG3Q9UJ98 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
STAG3Q9UJ98 ESPNP-201ENST00000270691 2015 ntBASIC25.56■■□□□ 1.68
STAG3Q9UJ98 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
STAG3Q9UJ98 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC25.56■■□□□ 1.68
STAG3Q9UJ98 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms