Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CPNE7Q9UBL6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.33■□□□□ 0.37
CPNE7Q9UBL6 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE7Q9UBL6 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE7Q9UBL6 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE7Q9UBL6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE7Q9UBL6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE7Q9UBL6 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE7Q9UBL6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE7Q9UBL6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CPNE7Q9UBL6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CPNE7Q9UBL6 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 AC007967.3-201ENST00000434308 558 ntBASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CPNE7Q9UBL6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 FAM220CP-201ENST00000395253 831 ntBASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 RBM17P3-201ENST00000417687 1192 ntBASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 AL355877.3-201ENST00000622820 899 ntBASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CPNE7Q9UBL6 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 AC104581.1-202ENST00000635932 2618 ntBASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 ABCD1P5-201ENST00000445663 754 ntBASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 AC106795.1-205ENST00000512851 1056 ntBASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 AL662844.1-201ENST00000546340 181 ntBASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 SLC25A6P4-201ENST00000586535 553 ntBASIC17.31■□□□□ 0.36
CPNE7Q9UBL6 MTDHP3-201ENST00000594186 672 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms