Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AL390961.4-201ENST00000623958 2535 ntBASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 NUS1P2-201ENST00000417358 873 ntBASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 TSPY19P-201ENST00000418461 509 ntBASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 TSPY18P-201ENST00000441642 509 ntBASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 UNC93B7-201ENST00000509439 705 ntBASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 AC096582.2-201ENST00000510860 516 ntBASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SPHK1Q9NYA1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 AL450487.1-201ENST00000426799 995 ntBASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 KRT18P31-201ENST00000506277 1292 ntBASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 TP73-AS1-210ENST00000637775 1455 ntBASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.23■□□□□ 0.35
SPHK1Q9NYA1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 RCN1P2-201ENST00000398357 915 ntBASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 AL121772.3-201ENST00000610840 674 ntBASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 AC007613.1-201ENST00000572811 2597 ntBASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SPHK1Q9NYA1 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SPHK1Q9NYA1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms