Protein–RNA interactions for Protein: Q9H9Z2

LIN28A, Protein lin-28 homolog A, humanhuman

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28AQ9H9Z2 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 AC087388.1-201ENST00000571370 1112 ntBASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 NEK4P2-201ENST00000580004 1012 ntBASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LIN28AQ9H9Z2 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.27■□□□□ 0.35
LIN28AQ9H9Z2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.27■□□□□ 0.35
LIN28AQ9H9Z2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LIN28AQ9H9Z2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
LIN28AQ9H9Z2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LIN28AQ9H9Z2 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
LIN28AQ9H9Z2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
LIN28AQ9H9Z2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LIN28AQ9H9Z2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.27■□□□□ 0.35
LIN28AQ9H9Z2 AL391005.1-201ENST00000623953 2435 ntBASIC17.27■□□□□ 0.35
LIN28AQ9H9Z2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
LIN28AQ9H9Z2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.27■□□□□ 0.35
LIN28AQ9H9Z2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LIN28AQ9H9Z2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.27■□□□□ 0.35
LIN28AQ9H9Z2 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 MTMR9LP-203ENST00000426597 1545 ntBASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 UBALD1-205ENST00000590891 2641 ntBASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 MIR564-202ENST00000385049 94 ntBASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LIN28AQ9H9Z2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 KRT18P23-201ENST00000435622 1283 ntBASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 AC112497.1-201ENST00000624824 639 ntBASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LIN28AQ9H9Z2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms