Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LRRC40Q9H9A6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC40Q9H9A6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC40Q9H9A6 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC40Q9H9A6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC40Q9H9A6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC40Q9H9A6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.21■□□□□ 0.5
LRRC40Q9H9A6 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 KRT18P38-201ENST00000449496 1282 ntBASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 AC092647.4-201ENST00000457211 535 ntBASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 ZNF444P1-201ENST00000559497 298 ntBASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 AC004263.2-201ENST00000617183 678 ntBASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC40Q9H9A6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 HBZP1-201ENST00000354915 429 ntBASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 AL359075.1-203ENST00000462729 1002 ntBASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 LTB4R2-202ENST00000528054 3092 ntBASIC18.19■□□□□ 0.5
LRRC40Q9H9A6 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 MIR662-201ENST00000384847 95 ntBASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 AC112907.2-201ENST00000448639 330 ntBASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 AP003733.1-201ENST00000491725 852 ntBASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.18■□□□□ 0.5
LRRC40Q9H9A6 AC009154.2-201ENST00000621177 724 ntBASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms