Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.29■□□□□ 0.68
NXF3Q9H4D5 AP000867.4-201ENST00000641616 219 ntBASIC19.29■□□□□ 0.68
NXF3Q9H4D5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NXF3Q9H4D5 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 AL590627.1-203ENST00000421194 1026 ntBASIC19.28■□□□□ 0.68
NXF3Q9H4D5 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
NXF3Q9H4D5 AL356309.3-201ENST00000624132 1934 ntBASIC19.27■□□□□ 0.68
NXF3Q9H4D5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NXF3Q9H4D5 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NXF3Q9H4D5 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.27■□□□□ 0.68
NXF3Q9H4D5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.27■□□□□ 0.68
NXF3Q9H4D5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NXF3Q9H4D5 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NXF3Q9H4D5 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
NXF3Q9H4D5 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.27■□□□□ 0.68
NXF3Q9H4D5 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.27■□□□□ 0.68
NXF3Q9H4D5 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
NXF3Q9H4D5 AC122714.2-201ENST00000502787 707 ntBASIC19.27■□□□□ 0.68
NXF3Q9H4D5 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.27■□□□□ 0.68
NXF3Q9H4D5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
NXF3Q9H4D5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.27■□□□□ 0.68
NXF3Q9H4D5 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
NXF3Q9H4D5 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
NXF3Q9H4D5 AC243591.1-201ENST00000452967 1364 ntBASIC19.27■□□□□ 0.68
NXF3Q9H4D5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
NXF3Q9H4D5 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.27■□□□□ 0.68
NXF3Q9H4D5 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NXF3Q9H4D5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.27■□□□□ 0.67
NXF3Q9H4D5 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NXF3Q9H4D5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
NXF3Q9H4D5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 BX640515.1-201ENST00000617215 977 ntBASIC19.26■□□□□ 0.67
NXF3Q9H4D5 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 FAM215A-202ENST00000632077 792 ntBASIC19.26■□□□□ 0.67
NXF3Q9H4D5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 SIRPAP1-201ENST00000448467 1770 ntBASIC19.26■□□□□ 0.67
NXF3Q9H4D5 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
NXF3Q9H4D5 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NXF3Q9H4D5 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms