Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC23.1■■□□□ 1.29
PCDH11XQ9BZA7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH11XQ9BZA7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH11XQ9BZA7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
PCDH11XQ9BZA7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 SIGLEC30P-201ENST00000455569 941 ntBASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 CIPC-205ENST00000555437 566 ntTSL 3 BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 AL513190.1-201ENST00000621254 727 ntBASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 AL805961.1-202ENST00000641562 540 ntBASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC23.09■■□□□ 1.29
PCDH11XQ9BZA7 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDH11XQ9BZA7 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC23.08■■□□□ 1.29
PCDH11XQ9BZA7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
PCDH11XQ9BZA7 MAL2-202ENST00000531508 892 ntTSL 3 BASIC23.08■■□□□ 1.29
PCDH11XQ9BZA7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC23.08■■□□□ 1.29
PCDH11XQ9BZA7 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC23.08■■□□□ 1.29
PCDH11XQ9BZA7 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
PCDH11XQ9BZA7 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
PCDH11XQ9BZA7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDH11XQ9BZA7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC23.08■■□□□ 1.29
PCDH11XQ9BZA7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
PCDH11XQ9BZA7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDH11XQ9BZA7 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC23.08■■□□□ 1.29
PCDH11XQ9BZA7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDH11XQ9BZA7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDH11XQ9BZA7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PCDH11XQ9BZA7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC23.08■■□□□ 1.28
PCDH11XQ9BZA7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
PCDH11XQ9BZA7 SNHG9-202ENST00000564014 471 ntBASIC23.08■■□□□ 1.28
PCDH11XQ9BZA7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC23.08■■□□□ 1.28
PCDH11XQ9BZA7 AC004790.2-201ENST00000623588 572 ntBASIC23.08■■□□□ 1.28
PCDH11XQ9BZA7 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 AC018445.3-201ENST00000624177 1945 ntBASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 IGLL3P-201ENST00000412472 434 ntBASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 MKNK2P1-201ENST00000437526 628 ntBASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 TMED1-207ENST00000591695 809 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 AC010654.1-201ENST00000615722 808 ntBASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDH11XQ9BZA7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 GPR89P-201ENST00000407924 1495 ntBASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 HTR5BP-201ENST00000430851 1154 ntBASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 RFPL4AP1-201ENST00000530883 850 ntBASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 RIN3-211ENST00000557762 517 ntTSL 3 BASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 LINC02084-201ENST00000606069 1096 ntBASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 AL078644.1-201ENST00000609881 752 ntBASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDH11XQ9BZA7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms